Jim Procter

JAL-3848 patched SwingJS runtime rebuilt

JAL-3848 j2s 3.2.10-v1 slivka-java-client jslib

    • binary
    /utils/jalviewjs/libjs/slivka-client-site.zip
JAL-3848 nominal build of slivka 0.8 compatible java client library

    • binary
    /utils/jalviewjs/libjs/slivka-client-site.zip
WIP
WIP
JAL-3842 2.11.1.5 what’s new, release notes, and version bump

Merge branch 'patch/JAL-3840_2_11_1_4' into releases/Release_2_11_1_Branch

JAL-3840 don’t update the modal residue count for gaps

    • -1
    • +6
    /src/jalview/datamodel/ResidueCount.java
JAL-3840 don’t update the modal residue count for gaps

    • -1
    • +6
    /src/jalview/datamodel/ResidueCount.java
fixes JAL-3840

    • -9
    • +1
    /src/jalview/datamodel/ResidueCount.java
fixes JAL-3840

    • -9
    • +1
    /src/jalview/datamodel/ResidueCount.java
JAL-3840 failing test - show that addGaps overflows

    • -1
    • +1
    /src/jalview/datamodel/ResidueCount.java
JAL-3840 failing test - show that addGaps overflows

    • -1
    • +1
    /src/jalview/datamodel/ResidueCount.java
JAL-3929 forgot to add in the dummy 3d-beacons db proxy

    • -0
    • +521
    /src/jalview/ws/dbsources/TDBeacons.java
JAL-3832 dummy 3d-beacons database client and code to create the TDBeaconsFTSPanel via the sequence fetcher dropdown menu

Merge branch 'releases/Release_2_11_1_Branch'

JAL-3816 release date updated to 9th March

JAL-3816 release date set for 8th March and updated what's new

JAL-3816 new known defects JAL-3705 and JAL-3806

Revert "Merge branch 'bug/JAL-3806_mappingCoversSequence' into releases/Release_2_11_1_Branch"

This reverts commit cb628aab46f9027e71b71203b322f96710e09990, reversing

changes made to a40669b2eeb34a6c760b63c172a31a194b456f24.

    • -111
    • +20
    /test/jalview/util/MappingUtilsTest.java
Revert "JAL-3816 release notes for JAL-3806"

This reverts commit ead40d75a04715c80c61e34e277bb995cb2bef90.

JAL-3816 release notes for JAL-3806

Merge branch 'bug/JAL-3806_mappingCoversSequence' into releases/Release_2_11_1_Branch

JAL-3816 JAL-3814 JAL-3813 JAL-3812 JAL-3811 JAL-3818 release notes and date for 2.11.1.4 release

Merge branch 'bug/JAL-3818_jmolDeadlock' into releases/Release_2_11_1_Branch

Merge branch 'releases/Release_2_11_1_4_debianpatches' into releases/Release_2_11_1_Branch

JAL-3818 process Jmol callbacks in AWT thread
JAL-3818 process Jmol callbacks in AWT thread
JAL-3821 patch for 2.11.2 to retrieve RNA ENA records as RNA

Merge branch 'feature/JAL-3692enaEndpoint' into patch/for2.11.2/JAL-3821_ena_rna_moltype

    • -1
    • +0
    /resources/lang/Messages_es.properties