1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
2 <!-- Generated by JAX-WS RI at http://jax-ws.dev.java.net. RI's version is Metro/2.1 (branches/2.1-6728; 2011-02-03T14:14:58+0000) JAXWS-RI/2.2.3 JAXWS/2.2. -->
3 <definitions targetNamespace="http://msa.data.compbio/01/01/2010/" name="ClustalWS" xmlns="http://schemas.xmlsoap.org/wsdl/" xmlns:wsp="http://www.w3.org/ns/ws-policy" xmlns:tns="http://msa.data.compbio/01/01/2010/" xmlns:xsd="http://www.w3.org/2001/XMLSchema" xmlns:wsp1_2="http://schemas.xmlsoap.org/ws/2004/09/policy" xmlns:soap="http://schemas.xmlsoap.org/wsdl/soap/" xmlns:wsam="http://www.w3.org/2007/05/addressing/metadata" xmlns:wsu="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-utility-1.0.xsd">
6 <xsd:import namespace="http://msa.data.compbio/01/01/2010/" schemaLocation="ClustalWS_schema1.xsd"/>
10 <part name="parameters" element="tns:align"/>
12 <message name="alignResponse">
13 <part name="parameters" element="tns:alignResponse"/>
15 <message name="UnsupportedRuntimeException">
16 <part name="fault" element="tns:UnsupportedRuntimeException"/>
18 <message name="LimitExceededException">
19 <part name="fault" element="tns:LimitExceededException"/>
21 <message name="JobSubmissionException">
22 <part name="fault" element="tns:JobSubmissionException"/>
24 <message name="presetAlign">
25 <part name="parameters" element="tns:presetAlign"/>
27 <message name="presetAlignResponse">
28 <part name="parameters" element="tns:presetAlignResponse"/>
30 <message name="WrongParameterException">
31 <part name="fault" element="tns:WrongParameterException"/>
33 <message name="customAlign">
34 <part name="parameters" element="tns:customAlign"/>
36 <message name="customAlignResponse">
37 <part name="parameters" element="tns:customAlignResponse"/>
39 <message name="getResult">
40 <part name="parameters" element="tns:getResult"/>
42 <message name="getResultResponse">
43 <part name="parameters" element="tns:getResultResponse"/>
45 <message name="ResultNotAvailableException">
46 <part name="fault" element="tns:ResultNotAvailableException"/>
48 <message name="cancelJob">
49 <part name="parameters" element="tns:cancelJob"/>
51 <message name="cancelJobResponse">
52 <part name="parameters" element="tns:cancelJobResponse"/>
54 <message name="getJobStatus">
55 <part name="parameters" element="tns:getJobStatus"/>
57 <message name="getJobStatusResponse">
58 <part name="parameters" element="tns:getJobStatusResponse"/>
60 <message name="pullExecStatistics">
61 <part name="parameters" element="tns:pullExecStatistics"/>
63 <message name="pullExecStatisticsResponse">
64 <part name="parameters" element="tns:pullExecStatisticsResponse"/>
66 <message name="getRunnerOptions">
67 <part name="parameters" element="tns:getRunnerOptions"/>
69 <message name="getRunnerOptionsResponse">
70 <part name="parameters" element="tns:getRunnerOptionsResponse"/>
72 <message name="getLimit">
73 <part name="parameters" element="tns:getLimit"/>
75 <message name="getLimitResponse">
76 <part name="parameters" element="tns:getLimitResponse"/>
78 <message name="getLimits">
79 <part name="parameters" element="tns:getLimits"/>
81 <message name="getLimitsResponse">
82 <part name="parameters" element="tns:getLimitsResponse"/>
84 <message name="getPresets">
85 <part name="parameters" element="tns:getPresets"/>
87 <message name="getPresetsResponse">
88 <part name="parameters" element="tns:getPresetsResponse"/>
90 <portType name="MsaWS">
91 <operation name="align">
92 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignRequest" message="tns:align"/>
93 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/alignResponse" message="tns:alignResponse"/>
94 <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/UnsupportedRuntimeException"/>
95 <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/LimitExceededException"/>
96 <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/align/Fault/JobSubmissionException"/>
98 <operation name="presetAlign">
99 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignRequest" message="tns:presetAlign"/>
100 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlignResponse" message="tns:presetAlignResponse"/>
101 <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/UnsupportedRuntimeException"/>
102 <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/LimitExceededException"/>
103 <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/JobSubmissionException"/>
104 <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/presetAlign/Fault/WrongParameterException"/>
106 <operation name="customAlign">
107 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlignRequest" message="tns:customAlign"/>
108 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlignResponse" message="tns:customAlignResponse"/>
109 <fault message="tns:UnsupportedRuntimeException" name="UnsupportedRuntimeException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/UnsupportedRuntimeException"/>
110 <fault message="tns:LimitExceededException" name="LimitExceededException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/LimitExceededException"/>
111 <fault message="tns:JobSubmissionException" name="JobSubmissionException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/JobSubmissionException"/>
112 <fault message="tns:WrongParameterException" name="WrongParameterException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/customAlign/Fault/WrongParameterException"/>
114 <operation name="getResult">
115 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultRequest" message="tns:getResult"/>
116 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResultResponse" message="tns:getResultResponse"/>
117 <fault message="tns:ResultNotAvailableException" name="ResultNotAvailableException" wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getResult/Fault/ResultNotAvailableException"/>
119 <operation name="cancelJob">
120 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobRequest" message="tns:cancelJob"/>
121 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/cancelJobResponse" message="tns:cancelJobResponse"/>
123 <operation name="getJobStatus">
124 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusRequest" message="tns:getJobStatus"/>
125 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getJobStatusResponse" message="tns:getJobStatusResponse"/>
127 <operation name="pullExecStatistics">
128 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsRequest" message="tns:pullExecStatistics"/>
129 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/pullExecStatisticsResponse" message="tns:pullExecStatisticsResponse"/>
131 <operation name="getRunnerOptions">
132 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsRequest" message="tns:getRunnerOptions"/>
133 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getRunnerOptionsResponse" message="tns:getRunnerOptionsResponse"/>
135 <operation name="getLimit">
136 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitRequest" message="tns:getLimit"/>
137 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitResponse" message="tns:getLimitResponse"/>
139 <operation name="getLimits">
140 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsRequest" message="tns:getLimits"/>
141 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getLimitsResponse" message="tns:getLimitsResponse"/>
143 <operation name="getPresets">
144 <input wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsRequest" message="tns:getPresets"/>
145 <output wsam:Action="http://msa.data.compbio/01/01/2010/MsaWS/getPresetsResponse" message="tns:getPresetsResponse"/>
148 <binding name="ClustalWSPortBinding" type="tns:MsaWS">
149 <soap:binding transport="http://schemas.xmlsoap.org/soap/http" style="document"/>
150 <operation name="align">
151 <soap:operation soapAction=""/>
153 <soap:body use="literal"/>
156 <soap:body use="literal"/>
158 <fault name="UnsupportedRuntimeException">
159 <soap:fault name="UnsupportedRuntimeException" use="literal"/>
161 <fault name="LimitExceededException">
162 <soap:fault name="LimitExceededException" use="literal"/>
164 <fault name="JobSubmissionException">
165 <soap:fault name="JobSubmissionException" use="literal"/>
168 <operation name="presetAlign">
169 <soap:operation soapAction=""/>
171 <soap:body use="literal"/>
174 <soap:body use="literal"/>
176 <fault name="UnsupportedRuntimeException">
177 <soap:fault name="UnsupportedRuntimeException" use="literal"/>
179 <fault name="LimitExceededException">
180 <soap:fault name="LimitExceededException" use="literal"/>
182 <fault name="JobSubmissionException">
183 <soap:fault name="JobSubmissionException" use="literal"/>
185 <fault name="WrongParameterException">
186 <soap:fault name="WrongParameterException" use="literal"/>
189 <operation name="customAlign">
190 <soap:operation soapAction=""/>
192 <soap:body use="literal"/>
195 <soap:body use="literal"/>
197 <fault name="UnsupportedRuntimeException">
198 <soap:fault name="UnsupportedRuntimeException" use="literal"/>
200 <fault name="LimitExceededException">
201 <soap:fault name="LimitExceededException" use="literal"/>
203 <fault name="JobSubmissionException">
204 <soap:fault name="JobSubmissionException" use="literal"/>
206 <fault name="WrongParameterException">
207 <soap:fault name="WrongParameterException" use="literal"/>
210 <operation name="getResult">
211 <soap:operation soapAction=""/>
213 <soap:body use="literal"/>
216 <soap:body use="literal"/>
218 <fault name="ResultNotAvailableException">
219 <soap:fault name="ResultNotAvailableException" use="literal"/>
222 <operation name="cancelJob">
223 <soap:operation soapAction=""/>
225 <soap:body use="literal"/>
228 <soap:body use="literal"/>
231 <operation name="getJobStatus">
232 <soap:operation soapAction=""/>
234 <soap:body use="literal"/>
237 <soap:body use="literal"/>
240 <operation name="pullExecStatistics">
241 <soap:operation soapAction=""/>
243 <soap:body use="literal"/>
246 <soap:body use="literal"/>
249 <operation name="getRunnerOptions">
250 <soap:operation soapAction=""/>
252 <soap:body use="literal"/>
255 <soap:body use="literal"/>
258 <operation name="getLimit">
259 <soap:operation soapAction=""/>
261 <soap:body use="literal"/>
264 <soap:body use="literal"/>
267 <operation name="getLimits">
268 <soap:operation soapAction=""/>
270 <soap:body use="literal"/>
273 <soap:body use="literal"/>
276 <operation name="getPresets">
277 <soap:operation soapAction=""/>
279 <soap:body use="literal"/>
282 <soap:body use="literal"/>
286 <service name="ClustalWS">
287 <port name="ClustalWSPort" binding="tns:ClustalWSPortBinding">
288 <soap:address location="REPLACE_WITH_ACTUAL_URL"/>