binaries/src/ViennaRNA/H/PKplex.h

   1 #ifndef PKPLEX_H
   2 #define PKPLEX_H
   3
   4 #include "data_structures.h"
   5
   6 extern dupVar *PlexHits;
   7 extern int    PlexHitsArrayLength;
   8 extern int    NumberOfHits;
   9 extern int    verbose;
  10
  11
  12 /**
  13  *  \brief
  14  */
  15 dupVar  **PKLduplexfold_XS( const char *s1,
  16                             int **access_s1,
  17                             const int threshold,
  18                             const int alignment_length,
  19                             const int delta);
  20
  21 int     arraySize(duplexT **array);
  22
  23 void    freeDuplexT(duplexT **array);
  24
  25 #endif