binaries/src/ViennaRNA/H/duplex.h

   1 #ifndef __VIENNA_RNA_PACKAGE_DUPLEX_H__
   2 #define __VIENNA_RNA_PACKAGE_DUPLEX_H__
   3
   4 #include "data_structures.h"
   5
   6 /**
   7  *  \file duplex.h
   8  *  \brief Duplex folding function declarations...
   9  */
  10
  11
  12 duplexT duplexfold( const char *s1,
  13                     const char *s2);
  14
  15 duplexT *duplex_subopt( const char *s1,
  16                         const char *s2,
  17                         int delta,
  18                         int w);
  19
  20 duplexT aliduplexfold(const char *s1[],
  21                       const char *s2[]);
  22
  23 duplexT *aliduplex_subopt(const char *s1[],
  24                           const char *s2[],
  25                           int delta,
  26                           int w);
  27
  28 #endif