2 # This is an example script that demonstrates how to automatically convert
3 # seqences from databanks into a format suitable for RNAfold and pipe the
6 if ( $n == 0 ) goto usage
7 if !( -f $argv[$n] ) goto nofile
8 readseq -f19 -pipe $argv[$n] | sed -e "/^>/\!s/[Tt]/U/g" | RNAfold $argv[1-$n]
11 echo "couldn't open file " $argv[$n]
13 echo "usage: Fold [RNAfold_options] sequence_file"