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68 <div class="title">interact Struct Reference</div> </div>
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72 <tr class="heading"><td colspan="2"><h2><a name="pub-attribs"></a>
73 Data Fields</h2></td></tr>
74 <tr class="memitem:a1fc8b3860c083f164daa9712690a3a56"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a1fc8b3860c083f164daa9712690a3a56"></a>
75 double * </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#a1fc8b3860c083f164daa9712690a3a56">Pi</a></td></tr>
76 <tr class="memdesc:a1fc8b3860c083f164daa9712690a3a56"><td class="mdescLeft"> </td><td class="mdescRight">probabilities of interaction <br/></td></tr>
77 <tr class="memitem:a54f8183542fff4c32ab7ace49a16c02c"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a54f8183542fff4c32ab7ace49a16c02c"></a>
78 double * </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#a54f8183542fff4c32ab7ace49a16c02c">Gi</a></td></tr>
79 <tr class="memdesc:a54f8183542fff4c32ab7ace49a16c02c"><td class="mdescLeft"> </td><td class="mdescRight">free energies of interaction <br/></td></tr>
80 <tr class="memitem:ad58303190f9e085c3ab59890cbf61223"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ad58303190f9e085c3ab59890cbf61223"></a>
81 double </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#ad58303190f9e085c3ab59890cbf61223">Gikjl</a></td></tr>
82 <tr class="memdesc:ad58303190f9e085c3ab59890cbf61223"><td class="mdescLeft"> </td><td class="mdescRight">full free energy for interaction between [k,i] k<i in longer seq and [j,l] j<l in shorter seq <br/></td></tr>
83 <tr class="memitem:a41793812abae560805414761fec398fe"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a41793812abae560805414761fec398fe"></a>
84 double </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#a41793812abae560805414761fec398fe">Gikjl_wo</a></td></tr>
85 <tr class="memdesc:a41793812abae560805414761fec398fe"><td class="mdescLeft"> </td><td class="mdescRight">Gikjl without contributions for prob_unpaired. <br/></td></tr>
86 <tr class="memitem:ab6d031a21388be8763b75ea74c937f17"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ab6d031a21388be8763b75ea74c937f17"></a>
87 int </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#ab6d031a21388be8763b75ea74c937f17">i</a></td></tr>
88 <tr class="memdesc:ab6d031a21388be8763b75ea74c937f17"><td class="mdescLeft"> </td><td class="mdescRight">k<i in longer seq <br/></td></tr>
89 <tr class="memitem:a61e457fbf943d57364be6ddf1b4e7b8a"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a61e457fbf943d57364be6ddf1b4e7b8a"></a>
90 int </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#a61e457fbf943d57364be6ddf1b4e7b8a">k</a></td></tr>
91 <tr class="memdesc:a61e457fbf943d57364be6ddf1b4e7b8a"><td class="mdescLeft"> </td><td class="mdescRight">k<i in longer seq <br/></td></tr>
92 <tr class="memitem:a7555cb6363d1479341eb72b9c087aa34"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a7555cb6363d1479341eb72b9c087aa34"></a>
93 int </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#a7555cb6363d1479341eb72b9c087aa34">j</a></td></tr>
94 <tr class="memdesc:a7555cb6363d1479341eb72b9c087aa34"><td class="mdescLeft"> </td><td class="mdescRight">j<l in shorter seq <br/></td></tr>
95 <tr class="memitem:a030ab45056342e12cb3955e4defd3904"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a030ab45056342e12cb3955e4defd3904"></a>
96 int </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#a030ab45056342e12cb3955e4defd3904">l</a></td></tr>
97 <tr class="memdesc:a030ab45056342e12cb3955e4defd3904"><td class="mdescLeft"> </td><td class="mdescRight">j<l in shorter seq <br/></td></tr>
98 <tr class="memitem:ac9fcb5dca54ec5faa76e02b6488b9524"><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ac9fcb5dca54ec5faa76e02b6488b9524"></a>
99 int </td><td class="memItemRight" valign="bottom"><a class="el" href="structinteract.html#ac9fcb5dca54ec5faa76e02b6488b9524">length</a></td></tr>
100 <tr class="memdesc:ac9fcb5dca54ec5faa76e02b6488b9524"><td class="mdescLeft"> </td><td class="mdescRight">length of longer sequence <br/></td></tr>
102 <hr/>The documentation for this struct was generated from the following file:<ul>
103 <li>/home/mescalin/ronny/public_html/programs/ViennaRNA/H/<a class="el" href="data__structures_8h_source.html">data_structures.h</a></li>
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