2 # $Name: fa_34_26_5 $ - $Id: Makefile.mpi4_sql,v 1.19 2004/11/19 15:28:26 wrp Exp $
6 # Makefile for MPI versions of the parallel library comparison programs.
7 # this file is derived from Makefile.pvm, with only a few differences:
8 # (1) -DMPI_SRC instead of -DPVM_SRC
9 # (2) programs are mp34comp*, ms34comp*, and mu34comp* rather than pv34comp*, etc.
10 # (3) MPI does not require/allow a "worker" program, thus no c3.work*
17 #ARCH = ALPHAMP (get from $ARCH)
19 #MPI_ROOT = /opt/share/mpi
20 #PLIB = -L${MPI_ROOT}/lib -lmpich
21 #XDIR = /seqprg/pvm3/bin/LINUX
22 XDIR = ${HOME}/pvm3/bin/LINUX
25 CFLAGS= -DMPI_SRC -DUNIX -DPCOMPLIB -DBFR=1200 -I${MPI_ROOT}/include -DSRAND=srand -DRAND=random -c -DHAS_INTTYPES -DSAMP_STATS -DMYSQL_DB -I/usr/include/mysql -DPGSQL_DB -I/usr/include/pgsql
26 # -DMYSQL_DB -I/usr/include/mysql
27 # -DSFCHAR="'|'" -DSUPERFAMNUM
29 # standard nxgetaa, no memory mapping for 0 - 6
30 #LGETLIB=getseq.o lgetlib.o
33 # memory mapping for 0FASTA, 5PIRVMS, 6GCGBIN
34 LGETLIB=getseq.o lgetlib.o lgetaa_m.o
39 SHOWBESTC = mshowbest.c
40 SHOWALIGN = mshowalign
44 NCBL_LIB=ncbl2_mlib.o mysql_lib.o
45 #NCBL_LIB=ncbl2_mlib.o
46 LIB_M= -L/usr/lib/mysql -lmysqlclient -lz -lm -L/usr/lib/pgsql -lpq -lcrypt -lssl
52 DROPNFA_O = drop_nfa.o
54 include Makefile.mpcom