2 # makefile for fasta3, fasta3_t. Use makefile.pvm for pvcompxx.
4 # options for Intel C compiler (v9.1)
6 # must be compiled/linked with /MT (or /MTd for debugging) to ensure
7 # multi-threaded staticly linked executables. /MD uses dynamic
8 # linking to DLL's, which may not be available on the users machine
16 CFLAGS= -DSHOWSIM -DWIN32 -DHZ=100 -DPROGRESS -DSAMP_STATS -DPGM_DOC -DTHR_EXIT=pthread_exit -D_CRT_SECURE_NO_WARNINGS=1
21 THR_LIBS= pthreadVC2.lib
23 DROPNFA_O = drop_nfa.obj
24 DROPGSW_O = dropgsw.obj
25 DROPGSW_SSE2_O = dropgsw_sse2.obj smith_waterman_sse2.obj
26 DROPRSS_O = dropnsw.obj
27 DROPRSS_SSE2_O = dropgsw_sse2.obj smith_waterman_sse2.obj
30 # renamed (fasta33) programs
31 include Makefile34.nmk_com
32 # conventional (fasta3) names
33 # include Makefile.common