1 /* Concurrent read version */
3 /* $Name: fa_34_26_5 $ - $Id: p_mw.h,v 1.17 2006/04/12 18:00:02 wrp Exp $ */
14 int n1; /* sequence number */
15 int score[3]; /* score */
16 int rscore; /* score from shuffled sequence */
17 int sw_score; /* optimal score from alignment */
18 double comp; /* karlin 1/lambda comp.parameter */
19 double H; /* karlin H information content */
33 struct a_struct *aln_d;
36 float percent, gpercent;
49 /* this structure passes library sequences to the worker threads