1 <?xml version="1.0" encoding="US-ASCII" standalone="yes"?>
\r
3 <runnerClassName>compbio.runner.predictors.Jpred</runnerClassName>
\r
6 <name>cluser-single</name>
\r
8 Dundee cluser configuration for single sequence prediction
\r
11 <option>-dbpath /homes/www-jpred/databases </option>
\r
12 <option>-dbname uniref90</option>
\r
13 <option>-jabaws</option>
\r
14 <option>-seq</option>
\r
19 <name>cluster-alignment</name>
\r
21 Dundee cluser configuration for multiple sequence alignment prediction
\r
24 <option>-dbpath /homes/www-jpred/databases </option>
\r
25 <option>-dbname uniref90</option>
\r
26 <option>-jabaws</option>
\r
33 4-core laptop configuration for single sequence prediction
\r
36 <option>-dbpath /data/UNIREFdb/</option>
\r
37 <option>-dbname ported_db</option>
\r
38 <option>-ncpu 3</option>
\r
39 <option>-jabaws</option>
\r
40 <option>-seq</option>
\r
45 <name>alignemnt</name>
\r
47 4-core laptop configuration for multiple sequence alignment prediction
\r
50 <option>-dbpath /data/UNIREFdb/</option>
\r
51 <option>-dbname ported_db</option>
\r
52 <option>-ncpu 3</option>
\r
53 <option>-jabaws</option>
\r