datadb/compbio/cassandra/DataBase.java

   1 package compbio.cassandra;
   2
   3 import java.util.List;
   4 import java.util.ArrayList;
   5 import java.util.Collections;
   6
   7 public class DataBase {
   8         private String date;
   9         private int total;                              // total number of jobs
  10         private int totalOK;                        // number of jobs with execution status OK
  11         private int totalStopped;                        // number of jobs with execution status STOPPED
  12         private int totalError;                         // number of jobs with execution status Jpred ERROR
  13         private int totalTimeOut;                       // number of jobs with execution status TIMEOUT
  14         private int totalJobs;
  15         private int totalId;                            // total jobs for current protein sequence
  16         private String id;
  17         private String ip;
  18         private String prot;                            // protein sequence
  19         private String jpred;
  20         private List<String> subProt;           // protein sequence divided by several parts for highlighting the particular part
  21         private List<Integer> timeRez;
  22         private List<Integer> timeTotalExec;
  23         private StructureJobLog logInfo;
  24         private AnnotatedProteinSequenceBean predictions;
  25         public DataBase() {
  26         }
  27
  28         public DataBase(String dat, int total) {
  29                 this.date = dat;
  30                 this.total = total;
  31         }
  32
  33         public void setDate(String dat) {
  34                 this.date = dat;
  35         }
  36
  37         public String getDate() {
  38                 return date;
  39         }
  40
  41         public void setTotal(int tot) {
  42                 this.total = tot;
  43         }
  44
  45         public int getTotal() {
  46                 return total;
  47         }
  48
  49         public void setTotalOK(int tot) {
  50                 this.totalOK = tot;
  51         }
  52
  53         public int getTotalOK() {
  54                 return totalOK;
  55         }
  56
  57         public void setTotalStopped(int tot) {
  58                 this.totalStopped = tot;
  59         }
  60
  61         public int getTotalStopped() {
  62                 return totalStopped;
  63         }
  64
  65         public void setTotalError(int tot) {
  66                 this.totalError = tot;
  67         }
  68
  69         public int getTotalError() {
  70                 return totalError;
  71         }
  72
  73         public void setTotalTimeOut(int tot) {
  74                 this.totalTimeOut = tot;
  75         }
  76
  77         public int getTotalTimeOut() {
  78                 return totalTimeOut;
  79         }
  80
  81         public void setTotalJobs(int totalJobs) {
  82                 this.totalJobs = totalJobs;
  83         }
  84
  85         public int getTotalJobs() {
  86                 return totalJobs;
  87         }
  88
  89         public void setTotalId(int totId) {
  90                 this.totalId = totId;
  91         }
  92
  93         public int getTotalId() {
  94                 return totalId;
  95         }
  96
  97         public void setProt(String prot) {
  98                 this.prot = prot;
  99         }
 100
 101         public String getProt() {
 102                 return prot;
 103         }
 104
 105         public void setJpred(String jpred) {
 106                 this.jpred = jpred;
 107         }
 108
 109         public String getJpred() {
 110                 return jpred;
 111         }
 112
 113         public void setId(String id) {
 114                 this.id = id;
 115         }
 116
 117         public String getId() {
 118                 return id;
 119         }
 120
 121         public void setIp(String ip) {
 122                 this.ip = ip;
 123         }
 124
 125         public String getIp() {
 126                 return ip;
 127         }
 128
 129         public void setSubProt(List<String> subProt) {
 130                 this.subProt = subProt;
 131         }
 132
 133         public List<String> getSubProt() {
 134                 return subProt;
 135         }
 136
 137         public void setTimeRez(List<Integer> timeRez) {
 138                 this.timeRez = timeRez;
 139         }
 140
 141         public List<Integer> getTimeRez() {
 142                 return timeRez;
 143         }
 144
 145         public void setTimeTotalExec(List<Integer> timeTotalExec) {
 146                 this.timeTotalExec = timeTotalExec;
 147         }
 148
 149         public List<Integer> getTimeTotalExec() {
 150                 return timeTotalExec;
 151         }
 152
 153         public void setLogInfo(StructureJobLog logInfo){
 154                 this.logInfo = logInfo;
 155         }
 156
 157         public StructureJobLog getLogInfo() {
 158                 return logInfo;
 159         }
 160
 161         public void setPredictions(AnnotatedProteinSequenceBean predictions){
 162                 this.predictions = predictions;
 163         }
 164
 165         public AnnotatedProteinSequenceBean getPredictions() {
 166                 return predictions;
 167         }
 168
 169 }