2 * This class was automatically generated with
\r
3 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
\r
8 package uk.ac.vamsas.objects.core.descriptors;
\r
10 //---------------------------------/
\r
11 //- Imported classes and packages -/
\r
12 //---------------------------------/
\r
14 import uk.ac.vamsas.objects.core.DataSet;
\r
17 * Class DataSetDescriptor.
\r
19 * @version $Revision$ $Date$
\r
21 public class DataSetDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
\r
24 //--------------------------/
\r
25 //- Class/Member Variables -/
\r
26 //--------------------------/
\r
29 * Field _elementDefinition.
\r
31 private boolean _elementDefinition;
\r
36 private java.lang.String _nsPrefix;
\r
41 private java.lang.String _nsURI;
\r
46 private java.lang.String _xmlName;
\r
51 private org.exolab.castor.xml.XMLFieldDescriptor _identity;
\r
58 public DataSetDescriptor() {
\r
60 _nsURI = "http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes";
\r
61 _xmlName = "DataSet";
\r
62 _elementDefinition = true;
\r
64 //-- set grouping compositor
\r
65 setCompositorAsSequence();
\r
66 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
\r
67 org.exolab.castor.mapping.FieldHandler handler = null;
\r
68 org.exolab.castor.xml.FieldValidator fieldValidator = null;
\r
69 //-- initialize attribute descriptors
\r
72 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
\r
73 this._identity = desc;
\r
74 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
75 public java.lang.Object getValue( java.lang.Object object )
\r
76 throws IllegalStateException
\r
78 DataSet target = (DataSet) object;
\r
79 return target.getId();
\r
81 public void setValue( java.lang.Object object, java.lang.Object value)
\r
82 throws IllegalStateException, IllegalArgumentException
\r
85 DataSet target = (DataSet) object;
\r
86 target.setId( (java.lang.String) value);
\r
87 } catch (java.lang.Exception ex) {
\r
88 throw new IllegalStateException(ex.toString());
\r
91 public java.lang.Object newInstance(java.lang.Object parent) {
\r
92 return new java.lang.String();
\r
95 desc.setHandler(handler);
\r
96 desc.setMultivalued(false);
\r
97 addFieldDescriptor(desc);
\r
99 //-- validation code for: _id
\r
100 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
102 org.exolab.castor.xml.validators.IdValidator typeValidator;
\r
103 typeValidator = new org.exolab.castor.xml.validators.IdValidator();
\r
104 fieldValidator.setValidator(typeValidator);
\r
106 desc.setValidator(fieldValidator);
\r
107 //-- initialize element descriptors
\r
110 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Sequence.class, "_sequenceList", "Sequence", org.exolab.castor.xml.NodeType.Element);
\r
111 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
112 public java.lang.Object getValue( java.lang.Object object )
\r
113 throws IllegalStateException
\r
115 DataSet target = (DataSet) object;
\r
116 return target.getSequence();
\r
118 public void setValue( java.lang.Object object, java.lang.Object value)
\r
119 throws IllegalStateException, IllegalArgumentException
\r
122 DataSet target = (DataSet) object;
\r
123 target.addSequence( (uk.ac.vamsas.objects.core.Sequence) value);
\r
124 } catch (java.lang.Exception ex) {
\r
125 throw new IllegalStateException(ex.toString());
\r
128 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
\r
130 DataSet target = (DataSet) object;
\r
131 target.removeAllSequence();
\r
132 } catch (java.lang.Exception ex) {
\r
133 throw new IllegalStateException(ex.toString());
\r
136 public java.lang.Object newInstance(java.lang.Object parent) {
\r
137 return new uk.ac.vamsas.objects.core.Sequence();
\r
140 desc.setHandler(handler);
\r
141 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
\r
142 desc.setRequired(true);
\r
143 desc.setMultivalued(true);
\r
144 addFieldDescriptor(desc);
\r
146 //-- validation code for: _sequenceList
\r
147 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
148 fieldValidator.setMinOccurs(1);
\r
151 desc.setValidator(fieldValidator);
\r
152 //-- _sequenceMappingList
\r
153 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.SequenceMapping.class, "_sequenceMappingList", "sequenceMapping", org.exolab.castor.xml.NodeType.Element);
\r
154 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
155 public java.lang.Object getValue( java.lang.Object object )
\r
156 throws IllegalStateException
\r
158 DataSet target = (DataSet) object;
\r
159 return target.getSequenceMapping();
\r
161 public void setValue( java.lang.Object object, java.lang.Object value)
\r
162 throws IllegalStateException, IllegalArgumentException
\r
165 DataSet target = (DataSet) object;
\r
166 target.addSequenceMapping( (uk.ac.vamsas.objects.core.SequenceMapping) value);
\r
167 } catch (java.lang.Exception ex) {
\r
168 throw new IllegalStateException(ex.toString());
\r
171 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
\r
173 DataSet target = (DataSet) object;
\r
174 target.removeAllSequenceMapping();
\r
175 } catch (java.lang.Exception ex) {
\r
176 throw new IllegalStateException(ex.toString());
\r
179 public java.lang.Object newInstance(java.lang.Object parent) {
\r
180 return new uk.ac.vamsas.objects.core.SequenceMapping();
\r
183 desc.setHandler(handler);
\r
184 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
\r
185 desc.setMultivalued(true);
\r
186 addFieldDescriptor(desc);
\r
188 //-- validation code for: _sequenceMappingList
\r
189 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
190 fieldValidator.setMinOccurs(0);
\r
193 desc.setValidator(fieldValidator);
\r
194 //-- _dataSetAnnotationsList
\r
195 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.DataSetAnnotations.class, "_dataSetAnnotationsList", "DataSetAnnotations", org.exolab.castor.xml.NodeType.Element);
\r
196 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
197 public java.lang.Object getValue( java.lang.Object object )
\r
198 throws IllegalStateException
\r
200 DataSet target = (DataSet) object;
\r
201 return target.getDataSetAnnotations();
\r
203 public void setValue( java.lang.Object object, java.lang.Object value)
\r
204 throws IllegalStateException, IllegalArgumentException
\r
207 DataSet target = (DataSet) object;
\r
208 target.addDataSetAnnotations( (uk.ac.vamsas.objects.core.DataSetAnnotations) value);
\r
209 } catch (java.lang.Exception ex) {
\r
210 throw new IllegalStateException(ex.toString());
\r
213 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
\r
215 DataSet target = (DataSet) object;
\r
216 target.removeAllDataSetAnnotations();
\r
217 } catch (java.lang.Exception ex) {
\r
218 throw new IllegalStateException(ex.toString());
\r
221 public java.lang.Object newInstance(java.lang.Object parent) {
\r
222 return new uk.ac.vamsas.objects.core.DataSetAnnotations();
\r
225 desc.setHandler(handler);
\r
226 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
\r
227 desc.setMultivalued(true);
\r
228 addFieldDescriptor(desc);
\r
230 //-- validation code for: _dataSetAnnotationsList
\r
231 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
232 fieldValidator.setMinOccurs(0);
\r
235 desc.setValidator(fieldValidator);
\r
236 //-- _alignmentList
\r
237 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Alignment.class, "_alignmentList", "Alignment", org.exolab.castor.xml.NodeType.Element);
\r
238 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
239 public java.lang.Object getValue( java.lang.Object object )
\r
240 throws IllegalStateException
\r
242 DataSet target = (DataSet) object;
\r
243 return target.getAlignment();
\r
245 public void setValue( java.lang.Object object, java.lang.Object value)
\r
246 throws IllegalStateException, IllegalArgumentException
\r
249 DataSet target = (DataSet) object;
\r
250 target.addAlignment( (uk.ac.vamsas.objects.core.Alignment) value);
\r
251 } catch (java.lang.Exception ex) {
\r
252 throw new IllegalStateException(ex.toString());
\r
255 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
\r
257 DataSet target = (DataSet) object;
\r
258 target.removeAllAlignment();
\r
259 } catch (java.lang.Exception ex) {
\r
260 throw new IllegalStateException(ex.toString());
\r
263 public java.lang.Object newInstance(java.lang.Object parent) {
\r
264 return new uk.ac.vamsas.objects.core.Alignment();
\r
267 desc.setHandler(handler);
\r
268 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
\r
269 desc.setMultivalued(true);
\r
270 addFieldDescriptor(desc);
\r
272 //-- validation code for: _alignmentList
\r
273 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
274 fieldValidator.setMinOccurs(0);
\r
277 desc.setValidator(fieldValidator);
\r
279 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Tree.class, "_treeList", "Tree", org.exolab.castor.xml.NodeType.Element);
\r
280 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
281 public java.lang.Object getValue( java.lang.Object object )
\r
282 throws IllegalStateException
\r
284 DataSet target = (DataSet) object;
\r
285 return target.getTree();
\r
287 public void setValue( java.lang.Object object, java.lang.Object value)
\r
288 throws IllegalStateException, IllegalArgumentException
\r
291 DataSet target = (DataSet) object;
\r
292 target.addTree( (uk.ac.vamsas.objects.core.Tree) value);
\r
293 } catch (java.lang.Exception ex) {
\r
294 throw new IllegalStateException(ex.toString());
\r
297 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
\r
299 DataSet target = (DataSet) object;
\r
300 target.removeAllTree();
\r
301 } catch (java.lang.Exception ex) {
\r
302 throw new IllegalStateException(ex.toString());
\r
305 public java.lang.Object newInstance(java.lang.Object parent) {
\r
306 return new uk.ac.vamsas.objects.core.Tree();
\r
309 desc.setHandler(handler);
\r
310 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
\r
311 desc.setMultivalued(true);
\r
312 addFieldDescriptor(desc);
\r
314 //-- validation code for: _treeList
\r
315 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
316 fieldValidator.setMinOccurs(0);
\r
319 desc.setValidator(fieldValidator);
\r
321 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(uk.ac.vamsas.objects.core.Provenance.class, "_provenance", "Provenance", org.exolab.castor.xml.NodeType.Element);
\r
322 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
323 public java.lang.Object getValue( java.lang.Object object )
\r
324 throws IllegalStateException
\r
326 DataSet target = (DataSet) object;
\r
327 return target.getProvenance();
\r
329 public void setValue( java.lang.Object object, java.lang.Object value)
\r
330 throws IllegalStateException, IllegalArgumentException
\r
333 DataSet target = (DataSet) object;
\r
334 target.setProvenance( (uk.ac.vamsas.objects.core.Provenance) value);
\r
335 } catch (java.lang.Exception ex) {
\r
336 throw new IllegalStateException(ex.toString());
\r
339 public java.lang.Object newInstance(java.lang.Object parent) {
\r
340 return new uk.ac.vamsas.objects.core.Provenance();
\r
343 desc.setHandler(handler);
\r
344 desc.setNameSpaceURI("http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes");
\r
345 desc.setRequired(true);
\r
346 desc.setMultivalued(false);
\r
347 addFieldDescriptor(desc);
\r
349 //-- validation code for: _provenance
\r
350 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
351 fieldValidator.setMinOccurs(1);
\r
354 desc.setValidator(fieldValidator);
\r
363 * Method getAccessMode.
\r
365 * @return the access mode specified for this class.
\r
367 public org.exolab.castor.mapping.AccessMode getAccessMode(
\r
373 * Method getIdentity.
\r
375 * @return the identity field, null if this class has no
\r
378 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
\r
384 * Method getJavaClass.
\r
386 * @return the Java class represented by this descriptor.
\r
388 public java.lang.Class getJavaClass(
\r
390 return uk.ac.vamsas.objects.core.DataSet.class;
\r
394 * Method getNameSpacePrefix.
\r
396 * @return the namespace prefix to use when marshaling as XML.
\r
398 public java.lang.String getNameSpacePrefix(
\r
404 * Method getNameSpaceURI.
\r
406 * @return the namespace URI used when marshaling and
\r
407 * unmarshaling as XML.
\r
409 public java.lang.String getNameSpaceURI(
\r
415 * Method getValidator.
\r
417 * @return a specific validator for the class described by this
\r
420 public org.exolab.castor.xml.TypeValidator getValidator(
\r
426 * Method getXMLName.
\r
428 * @return the XML Name for the Class being described.
\r
430 public java.lang.String getXMLName(
\r
436 * Method isElementDefinition.
\r
438 * @return true if XML schema definition of this Class is that
\r
440 * element or element with anonymous type definition.
\r
442 public boolean isElementDefinition(
\r
444 return _elementDefinition;
\r