63d218055388f2b68b4dc759555c8274e127e40f
[vamsas.git] / schemas / coreObject.xml
1 <?xml version="1.0" encoding="UTF-8"?>  
2 <VAMSAS xmlns="http://www.vamsas.org" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.vamsas.org
3 http://www.vamsas.ac.uk/build/VamsasClient/schemas/vamsas.xsd">
4         <SequenceSet>
5                 <Sequence start="1" end="167" id="a1127235554296">
6                         <sequence>KTAIITGGSRGIGKSIAIKLGKLGASIVLNYRNNTDALKNTIRELEDLNINVIAVQGDISNYKECEKIIKAALDKFNGIDILVNNAGITADNLILRMKEEEFDKVIETNLKGTFNCVKHCIPMIKRRYGKIINISSVVGVAGNVGQCNYAAAKAGVIGFTKSLAKEL</sequence>
7                         <name>Q899P0</name>
8                 </Sequence>
9                 <Sequence start="1" end="168" id="a1127235554297">
10                         <sequence>KIAIVTGASSGIGRAIAFKLASRGANLILGDVKIDELRKVAEEIAKETKVKVIPLYVNVGDFNSTKEFYNKGISELGVDYVDILVNNAGINRDALFVKMTYEQWDEVIKVDLYSMFNMTKQVVDMVKRNYGRIINISSLSWLGNIGQANYSAAKAGVIGFTKTLAREL</sequence>
11                         <name>Q972M3</name>
12                 </Sequence>
13                 <Sequence start="1" end="167" id="a1127235554298">
14                         <sequence>KVIVITGASSGIGEQVAMQVAEQGATPVLMARTEEKLKALADKIKETYNTPCYYYVLDVSEETEVQSVFSKVLQEVGRIDILVNNAGFGIFKTFEDASMDEVKDMFQVNVFGLVACTKAVLPYMVKRNGHIINIASLAGKIATPKSSAYAATKHAVLGFTNSLRMEL</sequence>
15                         <name>Q81M93</name>
16                 </Sequence>
17                 <Sequence start="1" end="167" id="a1127235554299">
18                         <sequence>KIALVTGAMGGLGTAICQALAKDGCIVAANCLPNFEPAAAWLGQQEALGFKFYVAEGDVSDFESCKAMVAKIEADLGPVDILVNNAGITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAEL</sequence>
19                         <name>NODG_AZOBR</name>
20                 </Sequence>
21                 <Sequence start="1" end="166" id="a1127235554300">
22                         <sequence>QTAVVTGGGKGIGRAICLALAREGADIVIAARTEKDIRETARMVEKEGRKALPVSTDIRVEEDVENMISEAVDAFGRIDILVNNAGVAYRKYMVETSTEEYDNIMDTNLKGMFFCTKYALPYLLKREGRIINISSGAGKHGIPKLSIYSASKFAVIGFTESIAYEI</sequence>
23                         <name>Q8PS57</name>
24                 </Sequence>
25                 <Sequence start="1" end="167" id="a1127235554301">
26                         <sequence>KTAIVTGAARGIGKAIALKFAAEGANIAFTDLVIDENAEKTRVELEAMGVKAKGYASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSAFNFIHACTPMMRQKAGSIINMASVVGVHGNAGQANYAASKAGMIALAKSIAQEL</sequence>
27                         <name>Q8A195</name>
28                 </Sequence>
29                 <Sequence start="1" end="164" id="a1127235554302">
30                         <sequence>KVVVVTGAGSGIGEATAKRFAHEGASVVLVGRNQEKLAKVAAQLKGAEHLIRATDVADLTDVEALFKEVAERFGRLDVLVNNAGVVKSGKVTELGVEDWKAVMSVDLDGVFYCTRTAMPALIASKGNIINVSSVSGLGGDWGMSFYNAAKGAITNFTRALALD</sequence>
31                         <name>Q888G8</name>
32                 </Sequence>
33                 <Sequence start="1" end="164" id="a1127235554303">
34                         <sequence>KVALVTGAANGIGLAIAERLYQEGATLALADWNEEQLAIVIEQFDSARVYAQKVDVSDPEQVQALVRKTVERFGRLDILVNNAGIHIPGTVLECSVQDWRRIASVNIDGVVYCAMHALPELIKTRGCMVNTASVSGLGGDWGAAFYCATKGAVVNFTRALALD</sequence>
35                         <name>Q9KRP5</name>
36                 </Sequence>
37                 <Sequence start="1" end="163" id="a1127235554304">
38                         <sequence>KIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLALNVTDVESIEATLKAINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREV</sequence>
39                         <name>Q87N22</name>
40                 </Sequence>
41                 <Alignment gapChar="-">
42                         <alignmentSequence start="1" end="167" refid="a1127235554296">
43                                 <sequence>KTAIITGGSRGIGKSIAIKLGKLGASIVLNYRNNTDALKNTIRELEDLN--INVIAVQGDISNYKECEKIIKAALDKFNG--IDILVNNAGITADNLILRMKEEEFDKVIETNLKGTFNCVKHCIPMIKRRYGKIINISSVVGVAGNVGQCNYAAAKAGVIGFTKSLAKEL</sequence>
44                                 <name>Q899P0</name>
45                         </alignmentSequence>
46                         <alignmentSequence start="1" end="168" refid="a1127235554297">
47                                 <sequence>KIAIVTGASSGIGRAIAFKLASRGANLILGDVKIDEL--RKVAEEIAKETKVKVIPLYVNVGDFNSTKEFYNKGISELGVDYVDILVNNAGINRDALFVKMTYEQWDEVIKVDLYSMFNMTKQVVDMVKRNYGRIINISSLSWL-GNIGQANYSAAKAGVIGFTKTLAREL</sequence>
48                                 <name>Q972M3</name>
49                         </alignmentSequence>
50                         <alignmentSequence start="1" end="167" refid="a1127235554298">
51                                 <sequence>KVIVITGASSGIGEQVAMQVAEQGATPVLMARTEEKL--KALADKIKETYNTPCYYYVLDVSEETEVQSVFSKVLQEVGR--IDILVNNAGFGIFKTFEDASMDEVKDMFQVNVFGLVACTKAVLPYMVKRNGHIINIASLAGKIATPKSSAYAATKHAVLGFTNSLRMEL</sequence>
52                                 <name>Q81M93</name>
53                         </alignmentSequence>
54                         <alignmentSequence start="1" end="167" refid="a1127235554299">
55                                 <sequence>KIALVTGAMGGLGTAICQALAKDGCIVAANCLPNFEPAAAWLGQQEALG--FKFYVAEGDVSDFESCKAMVAKIEADLGP--VDILVNNAGITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAEL</sequence>
56                                 <name>NODG_AZOBR</name>
57                         </alignmentSequence>
58                         <alignmentSequence start="1" end="166" refid="a1127235554300">
59                                 <sequence>QTAVVTGGGKGIGRAICLALAREGADIVIAARTEKDI--RETARMVEKEG-RKALPVSTDIRVEEDVENMISEAVDAFGR--IDILVNNAGVAYRKYMVETSTEEYDNIMDTNLKGMFFCTKYALPYLLKREGRIINISSGAGKHGIPKLSIYSASKFAVIGFTESIAYEI</sequence>
60                                 <name>Q8PS57</name>
61                         </alignmentSequence>
62                         <alignmentSequence start="1" end="167" refid="a1127235554301">
63                                 <sequence>KTAIVTGAARGIGKAIALKFAAEGANIAFTDLVIDENAEKTRVELEAMG--VKAKGYASNAANFEDTAKVVEEIHKDFGR--IDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSAFNFIHACTPMMRQKAGSIINMASVVGVHGNAGQANYAASKAGMIALAKSIAQEL</sequence>
64                                 <name>Q8A195</name>
65                         </alignmentSequence>
66                         <alignmentSequence start="1" end="164" refid="a1127235554302">
67                                 <sequence>KVVVVTGAGSGIGEATAKRFAHEGASVVLVGRNQEKL--AKVAAQLKG---AEHLIRATDVADLTDVEALFKEVAERFGR--LDVLVNNAGVVKSGKVTELGVEDWKAVMSVDLDGVFYCTRTAMPALIASKGNIINVSSVSGLGGDWGMSFYNAAKGAITNFTRALALD-</sequence>
68                                 <name>Q888G8</name>
69                         </alignmentSequence>
70                         <alignmentSequence start="1" end="164" refid="a1127235554303">
71                                 <sequence>KVALVTGAANGIGLAIAERLYQEGATLALADWNEEQL--AIVIEQFDS---ARVYAQKVDVSDPEQVQALVRKTVERFGR--LDILVNNAGIHIPGTVLECSVQDWRRIASVNIDGVVYCAMHALPELIKTRGCMVNTASVSGLGGDWGAAFYCATKGAVVNFTRALALD-</sequence>
72                                 <name>Q9KRP5</name>
73                         </alignmentSequence>
74                         <alignmentSequence start="1" end="163" refid="a1127235554304">
75                                 <sequence>KIALVTGASRGIGRAIAELLVERGATVIGTATSEGGA--AAISEYLG----ENGKGLALNVTDVESIEATLKAINDEFGA--IDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREV</sequence>
76                                 <name>Q87N22</name>
77                         </alignmentSequence>
78                         <Provenance>
79                                 <entry>
80                                         <User>jim</User>
81                                         <Action>edited</Action>
82                                         <Date>2005-12-21</Date>
83                                 </entry>
84                         </Provenance>
85                 </Alignment>
86                 <Provenance>
87                         <entry>
88                                 <User>jim</User>
89                                 <Action>edited</Action>
90                                 <Date>2005-11-21</Date>
91                         </entry>
92                 </Provenance>
93         </SequenceSet>
94 </VAMSAS>