1 <?xml version="1.0" encoding="US-ASCII" standalone="yes"?>
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3 <runnerClassName>compbio.runner.muscle.Muscle</runnerClassName>
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4 <limit isDefault="true">
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5 <seqNumber>1000</seqNumber>
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6 <seqLength>1000</seqLength>
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8 <limit isDefault="false">
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9 <preset># LocalEngineExecutionLimit #</preset>
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10 <seqNumber>20</seqNumber>
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11 <seqLength>500</seqLength>
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14 <!-- Separate limits for presets -->
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15 <limit isDefault="false">
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16 <preset>Protein alignment(Fastest speed)</preset>
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17 <seqNumber>2000</seqNumber>
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18 <seqLength>1000</seqLength>
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20 <limit isDefault="false">
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21 <preset>Nucleotide alignment(Fastest speed)</preset>
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22 <seqNumber>1000</seqNumber>
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23 <seqLength>3000</seqLength>
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25 <limit isDefault="false">
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26 <preset>Huge alignments (speed-oriented)</preset>
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27 <seqNumber>2000</seqNumber>
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28 <seqLength>3000</seqLength>
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