1 Clazz.declarePackage ("jalview.datamodel");
2 c$ = Clazz.declareType (jalview.datamodel, "DBRefSource");
3 Clazz.defineStatics (c$,
5 c$.UP_NAME = c$.prototype.UP_NAME = "UNIPROT_NAME".toUpperCase ();
6 c$.UNIPROTKB = c$.prototype.UNIPROTKB = "UniProtKB/TrEMBL".toUpperCase ();
7 c$.EMBLCDSProduct = c$.prototype.EMBLCDSProduct = "EMBLCDSProtein".toUpperCase ();
8 Clazz.defineStatics (c$,
14 c$.GENEDB = c$.prototype.GENEDB = "GeneDB".toUpperCase ();
15 c$.DNACODINGDBS = c$.prototype.DNACODINGDBS = Clazz.newArray (-1, [jalview.datamodel.DBRefSource.EMBL, jalview.datamodel.DBRefSource.EMBLCDS, jalview.datamodel.DBRefSource.GENEDB]);
16 c$.CODINGDBS = c$.prototype.CODINGDBS = Clazz.newArray (-1, [jalview.datamodel.DBRefSource.EMBLCDS, jalview.datamodel.DBRefSource.GENEDB]);
17 c$.PROTEINDBS = c$.prototype.PROTEINDBS = Clazz.newArray (-1, [jalview.datamodel.DBRefSource.UNIPROT, jalview.datamodel.DBRefSource.PDB, jalview.datamodel.DBRefSource.UNIPROTKB, jalview.datamodel.DBRefSource.EMBLCDSProduct]);
18 c$.PROTEINSEQ = c$.prototype.PROTEINSEQ = Clazz.newArray (-1, [jalview.datamodel.DBRefSource.UNIPROT, jalview.datamodel.DBRefSource.UNIPROTKB, jalview.datamodel.DBRefSource.EMBLCDSProduct]);
19 c$.PROTEINSTR = c$.prototype.PROTEINSTR = Clazz.newArray (-1, [jalview.datamodel.DBRefSource.PDB]);
20 c$.DOMAINDBS = c$.prototype.DOMAINDBS = Clazz.newArray (-1, [jalview.datamodel.DBRefSource.PFAM, jalview.datamodel.DBRefSource.RFAM]);
21 Clazz.defineStatics (c$,
24 "PROTSEQDB", "PROTSQ",
25 "CODINGSEQDB", "CODING",
26 "DNACODINGSEQDB", "XONCODING",
28 "MULTIACC", "MULTIACC",
29 "ALIGNMENTDB", "ALIGNMENTS");