2 * This class was automatically generated with
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3 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
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8 package jalview.schemabinding.version2.descriptors;
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10 //---------------------------------/
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11 //- Imported classes and packages -/
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12 //---------------------------------/
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14 import jalview.schemabinding.version2.JSeq;
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17 * Class JSeqDescriptor.
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19 * @version $Revision$ $Date$
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21 public class JSeqDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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24 //--------------------------/
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25 //- Class/Member Variables -/
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26 //--------------------------/
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29 * Field _elementDefinition.
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31 private boolean _elementDefinition;
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36 private java.lang.String _nsPrefix;
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41 private java.lang.String _nsURI;
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46 private java.lang.String _xmlName;
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53 public JSeqDescriptor() {
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55 _nsURI = "www.jalview.org";
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57 _elementDefinition = true;
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59 //-- set grouping compositor
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60 setCompositorAsSequence();
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61 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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62 org.exolab.castor.mapping.FieldHandler handler = null;
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63 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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64 //-- initialize attribute descriptors
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67 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute);
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68 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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69 public java.lang.Object getValue( java.lang.Object object )
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70 throws IllegalStateException
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72 JSeq target = (JSeq) object;
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73 if (!target.hasColour()) { return null; }
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74 return new java.lang.Integer(target.getColour());
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76 public void setValue( java.lang.Object object, java.lang.Object value)
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77 throws IllegalStateException, IllegalArgumentException
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80 JSeq target = (JSeq) object;
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81 // if null, use delete method for optional primitives
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82 if (value == null) {
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83 target.deleteColour();
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86 target.setColour( ((java.lang.Integer) value).intValue());
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87 } catch (java.lang.Exception ex) {
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88 throw new IllegalStateException(ex.toString());
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91 public java.lang.Object newInstance(java.lang.Object parent) {
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95 desc.setHandler(handler);
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96 desc.setMultivalued(false);
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97 addFieldDescriptor(desc);
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99 //-- validation code for: _colour
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100 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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102 org.exolab.castor.xml.validators.IntValidator typeValidator;
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103 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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104 fieldValidator.setValidator(typeValidator);
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105 typeValidator.setMinInclusive(-2147483648);
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106 typeValidator.setMaxInclusive(2147483647);
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108 desc.setValidator(fieldValidator);
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110 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_start", "start", org.exolab.castor.xml.NodeType.Attribute);
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111 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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112 public java.lang.Object getValue( java.lang.Object object )
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113 throws IllegalStateException
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115 JSeq target = (JSeq) object;
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116 if (!target.hasStart()) { return null; }
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117 return new java.lang.Integer(target.getStart());
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119 public void setValue( java.lang.Object object, java.lang.Object value)
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120 throws IllegalStateException, IllegalArgumentException
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123 JSeq target = (JSeq) object;
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124 // ignore null values for non optional primitives
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125 if (value == null) { return; }
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127 target.setStart( ((java.lang.Integer) value).intValue());
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128 } catch (java.lang.Exception ex) {
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129 throw new IllegalStateException(ex.toString());
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132 public java.lang.Object newInstance(java.lang.Object parent) {
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136 desc.setHandler(handler);
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137 desc.setRequired(true);
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138 desc.setMultivalued(false);
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139 addFieldDescriptor(desc);
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141 //-- validation code for: _start
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142 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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143 fieldValidator.setMinOccurs(1);
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145 org.exolab.castor.xml.validators.IntValidator typeValidator;
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146 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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147 fieldValidator.setValidator(typeValidator);
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148 typeValidator.setMinInclusive(-2147483648);
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149 typeValidator.setMaxInclusive(2147483647);
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151 desc.setValidator(fieldValidator);
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153 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);
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154 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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155 public java.lang.Object getValue( java.lang.Object object )
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156 throws IllegalStateException
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158 JSeq target = (JSeq) object;
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159 if (!target.hasEnd()) { return null; }
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160 return new java.lang.Integer(target.getEnd());
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162 public void setValue( java.lang.Object object, java.lang.Object value)
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163 throws IllegalStateException, IllegalArgumentException
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166 JSeq target = (JSeq) object;
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167 // ignore null values for non optional primitives
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168 if (value == null) { return; }
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170 target.setEnd( ((java.lang.Integer) value).intValue());
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171 } catch (java.lang.Exception ex) {
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172 throw new IllegalStateException(ex.toString());
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175 public java.lang.Object newInstance(java.lang.Object parent) {
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179 desc.setHandler(handler);
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180 desc.setRequired(true);
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181 desc.setMultivalued(false);
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182 addFieldDescriptor(desc);
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184 //-- validation code for: _end
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185 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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186 fieldValidator.setMinOccurs(1);
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188 org.exolab.castor.xml.validators.IntValidator typeValidator;
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189 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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190 fieldValidator.setValidator(typeValidator);
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191 typeValidator.setMinInclusive(-2147483648);
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192 typeValidator.setMaxInclusive(2147483647);
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194 desc.setValidator(fieldValidator);
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196 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
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197 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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198 public java.lang.Object getValue( java.lang.Object object )
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199 throws IllegalStateException
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201 JSeq target = (JSeq) object;
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202 if (!target.hasId()) { return null; }
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203 return new java.lang.Integer(target.getId());
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205 public void setValue( java.lang.Object object, java.lang.Object value)
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206 throws IllegalStateException, IllegalArgumentException
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209 JSeq target = (JSeq) object;
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210 // ignore null values for non optional primitives
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211 if (value == null) { return; }
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213 target.setId( ((java.lang.Integer) value).intValue());
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214 } catch (java.lang.Exception ex) {
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215 throw new IllegalStateException(ex.toString());
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218 public java.lang.Object newInstance(java.lang.Object parent) {
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222 desc.setHandler(handler);
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223 desc.setRequired(true);
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224 desc.setMultivalued(false);
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225 addFieldDescriptor(desc);
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227 //-- validation code for: _id
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228 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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229 fieldValidator.setMinOccurs(1);
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231 org.exolab.castor.xml.validators.IntValidator typeValidator;
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232 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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233 fieldValidator.setValidator(typeValidator);
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234 typeValidator.setMinInclusive(-2147483648);
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235 typeValidator.setMaxInclusive(2147483647);
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237 desc.setValidator(fieldValidator);
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239 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_hidden", "hidden", org.exolab.castor.xml.NodeType.Attribute);
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240 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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241 public java.lang.Object getValue( java.lang.Object object )
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242 throws IllegalStateException
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244 JSeq target = (JSeq) object;
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245 if (!target.hasHidden()) { return null; }
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246 return (target.getHidden() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
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248 public void setValue( java.lang.Object object, java.lang.Object value)
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249 throws IllegalStateException, IllegalArgumentException
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252 JSeq target = (JSeq) object;
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253 // if null, use delete method for optional primitives
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254 if (value == null) {
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255 target.deleteHidden();
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258 target.setHidden( ((java.lang.Boolean) value).booleanValue());
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259 } catch (java.lang.Exception ex) {
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260 throw new IllegalStateException(ex.toString());
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263 public java.lang.Object newInstance(java.lang.Object parent) {
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267 desc.setHandler(handler);
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268 desc.setMultivalued(false);
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269 addFieldDescriptor(desc);
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271 //-- validation code for: _hidden
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272 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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274 org.exolab.castor.xml.validators.BooleanValidator typeValidator;
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275 typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
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276 fieldValidator.setValidator(typeValidator);
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278 desc.setValidator(fieldValidator);
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279 //-- initialize element descriptors
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282 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Features.class, "_featuresList", "features", org.exolab.castor.xml.NodeType.Element);
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283 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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284 public java.lang.Object getValue( java.lang.Object object )
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285 throws IllegalStateException
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287 JSeq target = (JSeq) object;
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288 return target.getFeatures();
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290 public void setValue( java.lang.Object object, java.lang.Object value)
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291 throws IllegalStateException, IllegalArgumentException
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294 JSeq target = (JSeq) object;
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295 target.addFeatures( (jalview.schemabinding.version2.Features) value);
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296 } catch (java.lang.Exception ex) {
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297 throw new IllegalStateException(ex.toString());
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300 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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302 JSeq target = (JSeq) object;
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303 target.removeAllFeatures();
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304 } catch (java.lang.Exception ex) {
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305 throw new IllegalStateException(ex.toString());
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308 public java.lang.Object newInstance(java.lang.Object parent) {
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309 return new jalview.schemabinding.version2.Features();
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312 desc.setHandler(handler);
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313 desc.setNameSpaceURI("www.jalview.org");
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314 desc.setMultivalued(true);
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315 addFieldDescriptor(desc);
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317 //-- validation code for: _featuresList
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318 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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319 fieldValidator.setMinOccurs(0);
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322 desc.setValidator(fieldValidator);
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324 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Pdbids.class, "_pdbidsList", "pdbids", org.exolab.castor.xml.NodeType.Element);
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325 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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326 public java.lang.Object getValue( java.lang.Object object )
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327 throws IllegalStateException
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329 JSeq target = (JSeq) object;
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330 return target.getPdbids();
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332 public void setValue( java.lang.Object object, java.lang.Object value)
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333 throws IllegalStateException, IllegalArgumentException
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336 JSeq target = (JSeq) object;
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337 target.addPdbids( (jalview.schemabinding.version2.Pdbids) value);
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338 } catch (java.lang.Exception ex) {
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339 throw new IllegalStateException(ex.toString());
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342 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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344 JSeq target = (JSeq) object;
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345 target.removeAllPdbids();
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346 } catch (java.lang.Exception ex) {
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347 throw new IllegalStateException(ex.toString());
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350 public java.lang.Object newInstance(java.lang.Object parent) {
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351 return new jalview.schemabinding.version2.Pdbids();
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354 desc.setHandler(handler);
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355 desc.setNameSpaceURI("www.jalview.org");
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356 desc.setMultivalued(true);
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357 addFieldDescriptor(desc);
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359 //-- validation code for: _pdbidsList
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360 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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361 fieldValidator.setMinOccurs(0);
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364 desc.setValidator(fieldValidator);
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365 //-- _hiddenSequencesList
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366 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_hiddenSequencesList", "hiddenSequences", org.exolab.castor.xml.NodeType.Element);
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367 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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368 public java.lang.Object getValue( java.lang.Object object )
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369 throws IllegalStateException
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371 JSeq target = (JSeq) object;
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372 return target.getHiddenSequences();
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374 public void setValue( java.lang.Object object, java.lang.Object value)
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375 throws IllegalStateException, IllegalArgumentException
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378 JSeq target = (JSeq) object;
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379 // ignore null values for non optional primitives
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380 if (value == null) { return; }
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382 target.addHiddenSequences( ((java.lang.Integer) value).intValue());
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383 } catch (java.lang.Exception ex) {
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384 throw new IllegalStateException(ex.toString());
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387 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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389 JSeq target = (JSeq) object;
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390 target.removeAllHiddenSequences();
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391 } catch (java.lang.Exception ex) {
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392 throw new IllegalStateException(ex.toString());
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395 public java.lang.Object newInstance(java.lang.Object parent) {
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399 desc.setHandler(handler);
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400 desc.setNameSpaceURI("www.jalview.org");
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401 desc.setMultivalued(true);
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402 addFieldDescriptor(desc);
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404 //-- validation code for: _hiddenSequencesList
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405 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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406 fieldValidator.setMinOccurs(0);
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408 org.exolab.castor.xml.validators.IntValidator typeValidator;
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409 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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410 fieldValidator.setValidator(typeValidator);
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411 typeValidator.setMinInclusive(-2147483648);
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412 typeValidator.setMaxInclusive(2147483647);
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414 desc.setValidator(fieldValidator);
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423 * Method getAccessMode.
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425 * @return the access mode specified for this class.
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427 public org.exolab.castor.mapping.AccessMode getAccessMode(
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433 * Method getIdentity.
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435 * @return the identity field, null if this class has no
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438 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
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440 return super.getIdentity();
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444 * Method getJavaClass.
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446 * @return the Java class represented by this descriptor.
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448 public java.lang.Class getJavaClass(
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450 return jalview.schemabinding.version2.JSeq.class;
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454 * Method getNameSpacePrefix.
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456 * @return the namespace prefix to use when marshaling as XML.
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458 public java.lang.String getNameSpacePrefix(
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464 * Method getNameSpaceURI.
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466 * @return the namespace URI used when marshaling and
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467 * unmarshaling as XML.
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469 public java.lang.String getNameSpaceURI(
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475 * Method getValidator.
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477 * @return a specific validator for the class described by this
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480 public org.exolab.castor.xml.TypeValidator getValidator(
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486 * Method getXMLName.
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488 * @return the XML Name for the Class being described.
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490 public java.lang.String getXMLName(
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496 * Method isElementDefinition.
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498 * @return true if XML schema definition of this Class is that
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500 * element or element with anonymous type definition.
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502 public boolean isElementDefinition(
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504 return _elementDefinition;
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