2 // This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
3 // See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
4 // Any modifications to this file will be lost upon recompilation of the source schema.
5 // Generated on: 2018.09.18 at 04:36:20 PM BST
9 package jalview.xml.binding.jalviewBH;
11 import java.util.ArrayList;
12 import java.util.List;
13 import javax.xml.bind.annotation.XmlAccessType;
14 import javax.xml.bind.annotation.XmlAccessorType;
15 import javax.xml.bind.annotation.XmlAttribute;
16 import javax.xml.bind.annotation.XmlElement;
17 import javax.xml.bind.annotation.XmlRootElement;
18 import javax.xml.bind.annotation.XmlType;
22 * <p>Java class for anonymous complex type.
24 * <p>The following schema fragment specifies the expected content contained within this class.
29 * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
31 * <element ref="{www.vamsas.ac.uk/jalview/version2}Sequence" maxOccurs="unbounded" minOccurs="0"/>
32 * <element ref="{www.vamsas.ac.uk/jalview/version2}Annotation" maxOccurs="unbounded" minOccurs="0"/>
33 * <element name="sequenceSetProperties" maxOccurs="unbounded" minOccurs="0">
36 * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
37 * <attribute name="key" type="{http://www.w3.org/2001/XMLSchema}string" />
38 * <attribute name="value" type="{http://www.w3.org/2001/XMLSchema}string" />
40 * </complexContent>
43 * <element ref="{www.vamsas.ac.uk/jalview/version2}AlcodonFrame" maxOccurs="unbounded" minOccurs="0"/>
45 * <attribute name="gapChar" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
46 * <attribute name="datasetId" type="{http://www.w3.org/2001/XMLSchema}string" />
48 * </complexContent>
54 @XmlAccessorType(XmlAccessType.FIELD)
55 @XmlType(name = "", propOrder = {
58 "sequenceSetProperties",
61 @XmlRootElement(name = "SequenceSet")
62 public class SequenceSet {
65 private class Sequence {}
66 private class Annotation {}
67 private class AlcodonFrame {}
70 @XmlElement(name = "Sequence")
71 protected List<Sequence> sequence;
72 @XmlElement(name = "Annotation")
73 protected List<Annotation> annotation;
74 protected List<SequenceSet.SequenceSetProperties> sequenceSetProperties;
75 @XmlElement(name = "AlcodonFrame")
76 protected List<AlcodonFrame> alcodonFrame;
77 @XmlAttribute(name = "gapChar", required = true)
78 protected String gapChar;
79 @XmlAttribute(name = "datasetId")
80 protected String datasetId;
83 * Gets the value of the sequence property.
86 * This accessor method returns a reference to the live list,
87 * not a snapshot. Therefore any modification you make to the
88 * returned list will be present inside the JAXB object.
89 * This is why there is not a <CODE>set</CODE> method for the sequence property.
92 * For example, to add a new item, do as follows:
94 * getSequence().add(newItem);
99 * Objects of the following type(s) are allowed in the list
104 public List<Sequence> getSequence() {
105 if (sequence == null) {
106 sequence = new ArrayList<Sequence>();
108 return this.sequence;
112 * Gets the value of the annotation property.
115 * This accessor method returns a reference to the live list,
116 * not a snapshot. Therefore any modification you make to the
117 * returned list will be present inside the JAXB object.
118 * This is why there is not a <CODE>set</CODE> method for the annotation property.
121 * For example, to add a new item, do as follows:
123 * getAnnotation().add(newItem);
128 * Objects of the following type(s) are allowed in the list
129 * {@link Annotation }
133 public List<Annotation> getAnnotation() {
134 if (annotation == null) {
135 annotation = new ArrayList<Annotation>();
137 return this.annotation;
141 * Gets the value of the sequenceSetProperties property.
144 * This accessor method returns a reference to the live list,
145 * not a snapshot. Therefore any modification you make to the
146 * returned list will be present inside the JAXB object.
147 * This is why there is not a <CODE>set</CODE> method for the sequenceSetProperties property.
150 * For example, to add a new item, do as follows:
152 * getSequenceSetProperties().add(newItem);
157 * Objects of the following type(s) are allowed in the list
158 * {@link SequenceSet.SequenceSetProperties }
162 public List<SequenceSet.SequenceSetProperties> getSequenceSetProperties() {
163 if (sequenceSetProperties == null) {
164 sequenceSetProperties = new ArrayList<SequenceSet.SequenceSetProperties>();
166 return this.sequenceSetProperties;
170 * Gets the value of the alcodonFrame property.
173 * This accessor method returns a reference to the live list,
174 * not a snapshot. Therefore any modification you make to the
175 * returned list will be present inside the JAXB object.
176 * This is why there is not a <CODE>set</CODE> method for the alcodonFrame property.
179 * For example, to add a new item, do as follows:
181 * getAlcodonFrame().add(newItem);
186 * Objects of the following type(s) are allowed in the list
187 * {@link AlcodonFrame }
191 public List<AlcodonFrame> getAlcodonFrame() {
192 if (alcodonFrame == null) {
193 alcodonFrame = new ArrayList<AlcodonFrame>();
195 return this.alcodonFrame;
199 * Gets the value of the gapChar property.
206 public String getGapChar() {
211 * Sets the value of the gapChar property.
218 public void setGapChar(String value) {
219 this.gapChar = value;
223 * Gets the value of the datasetId property.
230 public String getDatasetId() {
235 * Sets the value of the datasetId property.
242 public void setDatasetId(String value) {
243 this.datasetId = value;
248 * <p>Java class for anonymous complex type.
250 * <p>The following schema fragment specifies the expected content contained within this class.
254 * <complexContent>
255 * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
256 * <attribute name="key" type="{http://www.w3.org/2001/XMLSchema}string" />
257 * <attribute name="value" type="{http://www.w3.org/2001/XMLSchema}string" />
259 * </complexContent>
265 @XmlAccessorType(XmlAccessType.FIELD)
267 public static class SequenceSetProperties {
269 @XmlAttribute(name = "key")
270 protected String key;
271 @XmlAttribute(name = "value")
272 protected String value;
275 * Gets the value of the key property.
282 public String getKey() {
287 * Sets the value of the key property.
294 public void setKey(String value) {
299 * Gets the value of the value property.
306 public String getValue() {
311 * Sets the value of the value property.
318 public void setValue(String value) {