2 * This class was automatically generated with
3 * <a href="http://www.castor.org">Castor 0.9.9M2</a>, using an XML
8 package org.vamsas.objects.core;
10 //---------------------------------/
11 //- Imported classes and packages -/
12 //---------------------------------/
14 import org.exolab.castor.mapping.AccessMode;
15 import org.exolab.castor.xml.TypeValidator;
16 import org.exolab.castor.xml.XMLFieldDescriptor;
17 import org.exolab.castor.xml.validators.*;
20 * Class AlignmentSequenceDescriptor.
22 * @version $Revision$ $Date$
24 public class AlignmentSequenceDescriptor extends org.vamsas.objects.core.SequenceTypeDescriptor {
27 //--------------------------/
28 //- Class/Member Variables -/
29 //--------------------------/
34 private java.lang.String nsPrefix;
39 private java.lang.String nsURI;
44 private java.lang.String xmlName;
49 private org.exolab.castor.xml.XMLFieldDescriptor identity;
56 public AlignmentSequenceDescriptor()
59 setExtendsWithoutFlatten(new org.vamsas.objects.core.SequenceTypeDescriptor());
60 nsURI = "http://www.vamsas.org";
61 xmlName = "alignmentSequence";
63 //-- set grouping compositor
64 setCompositorAsSequence();
65 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
66 org.exolab.castor.mapping.FieldHandler handler = null;
67 org.exolab.castor.xml.FieldValidator fieldValidator = null;
68 //-- initialize attribute descriptors
71 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_id", "id", org.exolab.castor.xml.NodeType.Attribute);
73 handler = new org.exolab.castor.xml.XMLFieldHandler() {
74 public java.lang.Object getValue( java.lang.Object object )
75 throws IllegalStateException
77 AlignmentSequence target = (AlignmentSequence) object;
78 return target.getId();
80 public void setValue( java.lang.Object object, java.lang.Object value)
81 throws IllegalStateException, IllegalArgumentException
84 AlignmentSequence target = (AlignmentSequence) object;
85 target.setId( (java.lang.String) value);
87 catch (java.lang.Exception ex) {
88 throw new IllegalStateException(ex.toString());
91 public java.lang.Object newInstance( java.lang.Object parent ) {
92 return new java.lang.String();
95 desc.setHandler(handler);
96 desc.setMultivalued(false);
97 addFieldDescriptor(desc);
99 //-- validation code for: _id
100 fieldValidator = new org.exolab.castor.xml.FieldValidator();
103 desc.setValidator(fieldValidator);
105 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Object.class, "_refid", "refid", org.exolab.castor.xml.NodeType.Attribute);
106 desc.setReference(true);
107 handler = new org.exolab.castor.xml.XMLFieldHandler() {
108 public java.lang.Object getValue( java.lang.Object object )
109 throws IllegalStateException
111 AlignmentSequence target = (AlignmentSequence) object;
112 return target.getRefid();
114 public void setValue( java.lang.Object object, java.lang.Object value)
115 throws IllegalStateException, IllegalArgumentException
118 AlignmentSequence target = (AlignmentSequence) object;
119 target.setRefid( (java.lang.Object) value);
121 catch (java.lang.Exception ex) {
122 throw new IllegalStateException(ex.toString());
125 public java.lang.Object newInstance( java.lang.Object parent ) {
126 return new java.lang.Object();
129 desc.setHandler(handler);
130 desc.setRequired(true);
131 desc.setMultivalued(false);
132 addFieldDescriptor(desc);
134 //-- validation code for: _refid
135 fieldValidator = new org.exolab.castor.xml.FieldValidator();
136 fieldValidator.setMinOccurs(1);
139 desc.setValidator(fieldValidator);
140 //-- initialize element descriptors
142 //-- _alignmentSequenceAnnotationList
143 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(org.vamsas.objects.core.AlignmentSequenceAnnotation.class, "_alignmentSequenceAnnotationList", "AlignmentSequenceAnnotation", org.exolab.castor.xml.NodeType.Element);
144 handler = new org.exolab.castor.xml.XMLFieldHandler() {
145 public java.lang.Object getValue( java.lang.Object object )
146 throws IllegalStateException
148 AlignmentSequence target = (AlignmentSequence) object;
149 return target.getAlignmentSequenceAnnotation();
151 public void setValue( java.lang.Object object, java.lang.Object value)
152 throws IllegalStateException, IllegalArgumentException
155 AlignmentSequence target = (AlignmentSequence) object;
156 target.addAlignmentSequenceAnnotation( (org.vamsas.objects.core.AlignmentSequenceAnnotation) value);
158 catch (java.lang.Exception ex) {
159 throw new IllegalStateException(ex.toString());
162 public java.lang.Object newInstance( java.lang.Object parent ) {
163 return new org.vamsas.objects.core.AlignmentSequenceAnnotation();
166 desc.setHandler(handler);
167 desc.setNameSpaceURI("http://www.vamsas.org");
168 desc.setMultivalued(true);
169 addFieldDescriptor(desc);
171 //-- validation code for: _alignmentSequenceAnnotationList
172 fieldValidator = new org.exolab.castor.xml.FieldValidator();
173 fieldValidator.setMinOccurs(0);
176 desc.setValidator(fieldValidator);
177 } //-- org.vamsas.objects.core.AlignmentSequenceDescriptor()
185 * Method getAccessMode
191 public org.exolab.castor.mapping.AccessMode getAccessMode()
194 } //-- org.exolab.castor.mapping.AccessMode getAccessMode()
201 * @return ClassDescriptor
203 public org.exolab.castor.mapping.ClassDescriptor getExtends()
205 return super.getExtends();
206 } //-- org.exolab.castor.mapping.ClassDescriptor getExtends()
213 * @return FieldDescriptor
215 public org.exolab.castor.mapping.FieldDescriptor getIdentity()
217 if (identity == null)
218 return super.getIdentity();
220 } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity()
223 * Method getJavaClass
229 public java.lang.Class getJavaClass()
231 return org.vamsas.objects.core.AlignmentSequence.class;
232 } //-- java.lang.Class getJavaClass()
235 * Method getNameSpacePrefix
241 public java.lang.String getNameSpacePrefix()
244 } //-- java.lang.String getNameSpacePrefix()
247 * Method getNameSpaceURI
253 public java.lang.String getNameSpaceURI()
256 } //-- java.lang.String getNameSpaceURI()
259 * Method getValidator
263 * @return TypeValidator
265 public org.exolab.castor.xml.TypeValidator getValidator()
268 } //-- org.exolab.castor.xml.TypeValidator getValidator()
277 public java.lang.String getXMLName()
280 } //-- java.lang.String getXMLName()