4 package org.vamsas.test.simpleclient;
7 import java.io.IOException;
9 import java.util.Vector;
11 import org.apache.commons.logging.Log;
12 import org.apache.commons.logging.LogFactory;
13 import org.exolab.castor.xml.MarshalException;
14 import org.exolab.castor.xml.ValidationException;
15 import org.vamsas.client.ClientHandle;
16 import org.vamsas.client.IVorbaIdFactory;
17 import org.vamsas.client.SessionHandle;
18 import org.vamsas.client.UserHandle;
19 import org.vamsas.client.simpleclient.AppDataOutputStream;
20 import org.vamsas.client.simpleclient.FileWatcher;
21 import org.vamsas.client.simpleclient.IdFactory;
22 import org.vamsas.client.simpleclient.SessionFile;
23 import org.vamsas.client.simpleclient.SimpleDocBinding;
24 import org.vamsas.client.simpleclient.SimpleDocument;
25 import org.vamsas.client.simpleclient.VamsasArchive;
26 import org.vamsas.client.simpleclient.VamsasArchiveReader;
27 import org.vamsas.client.simpleclient.VamsasFile;
28 import org.vamsas.objects.core.AppData;
29 import org.vamsas.objects.core.ApplicationData;
30 import org.vamsas.objects.core.User;
31 import org.vamsas.objects.core.VamsasDocument;
32 import org.vamsas.objects.utils.AppDataReference;
33 import org.vamsas.objects.utils.DocumentStuff;
34 import org.vamsas.objects.utils.ProvenanceStuff;
35 import org.vamsas.objects.utils.SeqSet;
36 import org.vamsas.objects.utils.document.VersionEntries;
37 import org.vamsas.test.objects.Core;
41 * test the VamsasFile routines for watching, reading and updating a vamsas document jar file.
42 * simple document access base class.
44 public class ArchiveClient extends IdFactory {
46 private Log log = LogFactory.getLog(ArchiveClient.class);
47 // protected UserHandle user=null;
48 // protected ClientHandle me = new ClientHandle("ArchiveClient","0.01");
55 public ArchiveClient(UserHandle user, VamsasFile vsess) {
56 super(new SessionHandle("vamsasfile://"+vsess.getVamsasFile()), new ClientHandle("ArchiveClient","0.01"), user);
60 private void _openVsess(File vsess) {
62 this.vsess = new VamsasFile(vsess);
65 log.error("Couldn't open session for file "+vsess,e);
69 public ArchiveClient(String username, String organization, File vsess) {
70 super(new SessionHandle("vamsasfile://"+vsess), new ClientHandle("ArchiveClient","0.01"), new UserHandle(username, organization));
74 public ArchiveClient(String username, String organization, String clientName, String clientVersion, File vsess) {
75 super(new SessionHandle("vamsasfile://"+vsess), new ClientHandle(clientName, clientVersion), new UserHandle(username, organization));
81 throw new Error("ArchiveClient instance is invalid!.");
85 * watch the document file for updates.
86 * @param time - length of time to watch for.
87 * @return read only IO interface for session document.
89 public ClientDoc watch(long time) {
91 FileWatcher watcher = new FileWatcher(vsess.getVamsasFile());
92 long endtime=System.currentTimeMillis()+time;
94 org.vamsas.client.simpleclient.Lock doclock;
97 Thread.sleep(50); // tuning.
98 doclock=watcher.getChangedState();
99 } while (doclock==null && (time==0 || endtime>System.currentTimeMillis()));
103 doclock = vsess.getLock(doclock);
104 VamsasArchiveReader varc = new VamsasArchiveReader(vsess.getVamsasFile());
105 return _getReadonly(varc);
107 } catch (Exception e) {
108 log.error("Whilst watching file "+vsess.getVamsasFile(), e);
113 // from ClientDocument.getClientAppdata
114 private AppData[] getAppData(VamsasDocument doc) {
116 log.debug("extractAppData called for null document object");
119 AppData appsGlobal=null, usersData=null;
120 Vector apldataset = AppDataReference.getUserandApplicationsData(
121 doc, this.getUserHandle(), this.getClientHandle());
122 if (apldataset!=null) {
123 if (apldataset.size()>0) {
124 AppData clientdat = (AppData) apldataset.get(0);
125 if (clientdat instanceof ApplicationData) {
126 appsGlobal = (ApplicationData) clientdat;
127 if (apldataset.size()>1) {
128 clientdat = (AppData) apldataset.get(1);
129 if (clientdat instanceof User) {
130 usersData = (User) clientdat;
132 if (apldataset.size()>2)
133 log.info("Ignoring additional ("+(apldataset.size()-2)+") AppDatas returned by document appdata query.");
136 log.warn("Unexpected entry in AppDataReference query: id="+clientdat.getVorbaId()+" type="+clientdat.getClass().getName());
138 apldataset.removeAllElements(); // destroy references.
141 return new AppData[] { appsGlobal, usersData};
144 protected ClientDoc _getReadonly(VamsasArchiveReader vreader) throws IOException, ValidationException, MarshalException {
147 SimpleDocBinding docb = new SimpleDocBinding();
150 d = docb.getVamsasDocument(vreader);
153 ClientDoc creader = new ClientDoc(d, null, vreader, getProvenanceUser());
161 * @return user field for a provenance entry
163 protected String getProvenanceUser() {
164 return new String(getUserHandle().getFullName()+" ["+getClientHandle().getClientUrn()+"]");
167 public ClientDoc getUpdateable() {
171 VamsasArchive varc = new VamsasArchive(vsess, true, false); // read archive, write as vamsasDocument, don't erase original contents.
173 VamsasDocument d = varc.getVamsasDocument(getProvenanceUser(), "Created new document.", VersionEntries.latestVersion()); // VAMSAS: provenance user and client combined
176 log.warn("Backing out from opening a VamsasArchive writable IO session");
177 varc.cancelArchive();
180 ClientDoc cdoc = new ClientDoc(d, varc, varc.getOriginalArchiveReader(), getProvenanceUser());
183 } catch (Exception e) {
184 log.error("Failed to get Updateable version of "+vsess.getVamsasFile(), e);
189 * trust client to not do anything stupid to the document roots which will now be written to the archive.
191 * @return true if write was a success.
193 public boolean doUpdate(ClientDoc cdoc) {
196 log.warn("Invalid ClientDoc passed to org.vamsas.test.simpleclient.doUpdate()");
199 if (cdoc.iohandler==null) {
200 log.warn("Read only ClientDoc object passed to org.vamsas.test.simpleclient.doUpdate()");
203 if (cdoc.iohandler.getVorba()!=this) {
204 log.error("Mismatch between ClientDoc instances and ArchiveClient instances!");
208 // do any appDatas first.
209 if (cdoc.iohandler.transferRemainingAppDatas())
210 log.debug("Remaining appdatas were transfered.");
211 cdoc.iohandler.putVamsasDocument(cdoc.doc);
212 cdoc.iohandler.closeArchive();
216 } catch (Exception e) {
217 log.warn("While updating archive in "+vsess.getVamsasFile(),e);
225 public static void usage() {
226 throw new Error("Usage: Username Organization VamsasFile [command,args]*");
228 public static void main(String[] args) {
233 ArchiveClient client = new ArchiveClient(args[0],args[1], new File(args[2]));
237 cdoc = client.getUpdateable();
238 // ArchiveReports.reportDocument(cdoc.doc, cdoc.getReader(), true, System.out);
239 System.out.println("Report Roots :");
240 ArchiveReports.rootReport(cdoc.getVamsasRoots(), true, System.out);
241 cdoc.addVamsasRoot(Core.getDemoVamsas());
242 System.out.println("Doing update.");
243 client.doUpdate(cdoc);
247 System.out.println("Watch for more... ("+u+" left)");
248 cdoc = client.watch(0);
250 System.out.println("****\nUpdate detected at "+new Date());
251 ArchiveReports.reportDocument(cdoc.doc, cdoc.getReader(), true, System.out);
253 System.out.println("!!!! Null document update detected at "+new Date());
257 catch (Exception e) {
258 client.log.error("Broken!", e);
260 System.out.println("Finished at "+new Date());