2 * This file is part of the Vamsas Client version 0.2.
\r
3 * Copyright 2010 by Jim Procter, Iain Milne, Pierre Marguerite,
\r
4 * Andrew Waterhouse and Dominik Lindner.
\r
6 * Earlier versions have also been incorporated into Jalview version 2.4
\r
7 * since 2008, and TOPALi version 2 since 2007.
\r
9 * The Vamsas Client is free software: you can redistribute it and/or modify
\r
10 * it under the terms of the GNU Lesser General Public License as published by
\r
11 * the Free Software Foundation, either version 3 of the License, or
\r
12 * (at your option) any later version.
\r
14 * The Vamsas Client is distributed in the hope that it will be useful,
\r
15 * but WITHOUT ANY WARRANTY; without even the implied warranty of
\r
16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
\r
17 * GNU Lesser General Public License for more details.
\r
19 * You should have received a copy of the GNU Lesser General Public License
\r
20 * along with the Vamsas Client. If not, see <http://www.gnu.org/licenses/>.
\r
22 package uk.ac.vamsas.objects;
\r
24 import uk.ac.vamsas.objects.core.*;
\r
26 public interface IDocumentUpdater {
\r
27 public void update(Alignment vobj);
\r
29 public void update(AlignmentAnnotation vobj);
\r
31 public void update(AlignmentSequence vobj);
\r
33 public void update(AlignmentSequenceAnnotation vobj);
\r
35 public void update(AnnotationElement vobj);
\r
37 public void update(AppData vobj);
\r
39 public void update(ApplicationData vobj);
\r
41 public void update(Common vobj);
\r
43 public void update(DataSet vobj);
\r
45 public void update(DataSetAnnotations vobj);
\r
47 public void update(DbRef vobj);
\r
49 public void update(Entry vobj);
\r
51 public void update(Glyph vobj);
\r
53 public void update(Input vobj);
\r
55 public void update(Instance vobj);
\r
57 public void update(Link vobj);
\r
59 public void update(LockFile vobj);
\r
61 public void update(Map vobj);
\r
63 // TODO: replace with mapRangeType handler public void update(MapList vobj) {}
\r
65 public void update(SequenceMapping vobj);
\r
67 public void update(Newick vobj);
\r
69 public void update(Param vobj);
\r
71 public void update(Pos vobj);
\r
73 public void update(Property vobj);
\r
75 public void update(Provenance vobj);
\r
77 public void update(RangeAnnotation vobj);
\r
79 public void update(RangeType vobj);
\r
81 public void update(Score vobj);
\r
83 public void update(Seg vobj);
\r
85 public void update(Sequence vobj);
\r
87 public void update(SequenceType vobj);
\r
89 public void update(Tree vobj);
\r
91 public void update(User vobj);
\r
93 public void update(VAMSAS vobj);
\r
95 public void update(VamsasDocument vobj);
\r