testsrc/testdata/ljobs/ClustalW#1015373448154965/output.txt

   1 CLUSTAL 2.0.12 multiple sequence alignment
   2
   3
   4 Sequence0       MLEELECGAPGARGAATAMDCK--DRPAFPVKKLIQARLPFKRLN---------------
   5 Sequence2       MLEEPECGAPGARGEAAAMDCK--DRPAFPVKKLIQARLPFKRLN---------------
   6 Sequence1       MLEEPEAATR----TAAAVDCK--DRPGFPVKRLIQARLPFKRLN---------------
   7 Sequence3       MPGK----------EAAVNVMQ--SSTKSNTKKMVQARLPFKRLN---------------
   8 Sequence4       MHAGVVKTPLSGRKKDAAVPAKSAEKTASGGKKFVQTRLPFKLLTPGGGAVPTSSSSSSS
   9 Sequence5       --------------MESVAKGDCKLSPSASAKKLKQTRLPFQILS---------------
  10 Sequence7       --------------------------------MLIDLWYRFSFIT---------------
  11 Sequence6       ---------------------------------MNESETRINSPP---------------
  12                                                  : :    :.
  13
  14 Sequence0       -----------------LVPKGK-----------------------------------AD
  15 Sequence2       -----------------LVPKEK-----------------------------------ID
  16 Sequence1       -----------------LVPKEK-----------------------------------VE
  17 Sequence3       -----------------PVPKDE-----------------------------------GC
  18 Sequence4       PATIGSGPVTVILDEDDPAPRKRKLSYDDESPSEGTGCSTGQLRRSTSKENLDLASSIAT
  19 Sequence5       -------------GSPVAAPEATKS---------------------------------TP
  20 Sequence7       --------------YAKSIGSNRS----------------------------------NA
  21 Sequence6       -------------------PKKE-------------------------------------
  22
  23
  24 Sequence0       DMSDDQGTS----VQSKSPDLEASLDTLENNCHVGS--DIDFRPKLVNGK----------
  25 Sequence2       DGLDDTGGSRAGPVQTQLHNLETSLDHLEN-CHMGS--DIDFRPKLVNGK----------
  26 Sequence1       EDTSPKAAV-----ESKVPDLQLSLGTFESQCHTGS--HVGLSTKLVGGQ----------
  27 Sequence3       LEEKKVRITKNVSPQKMLHSLNSSMEDMENDCDMET--ETVPIPKAVNGK----------
  28 Sequence4       KKVKTTDSVVEDVIELDEDEADKEIEDQDQLVEAKSSKEVKLKPKKSEGKKGSPAPIQIK
  29 Sequence5       NRKRKPSIEADTNRATKIGRTSEAKENVKDSVEPVVVLDEESTEAPVANDS---------
  30 Sequence7       NTNKNKGESSPGSHKKMKQVVVVLVGNWKAYCLTANFKLPIIFP----------------
  31 Sequence6       -KAEEEGSVVESEKENQTPAAVITIVDEAPATPVKG------------------------
  32
  33
  34 Sequence0       ------------------GPLDN----FLRNRIETSIGQSTVIIDLTEDSNEQPDSLVDH
  35 Sequence2       ------------------GPLDN----FLRSQVETSIGQAVVIIDLTEDSSNPPDNMVGH
  36 Sequence1       ------------------GPIDS----FLRATIKPVP--SVVIIDLTENCSDIPDSPEGH
  37 Sequence3       ------------------GPLDN----YIRKAPKVSHAPSITTIDLTEESNISISN----
  38 Sequence4       LPLVNKRSKRRKSLKKSEEPLETSTADVAKGDSESSDDIEIIAEELNPQKRQKVQTPREK
  39 Sequence5       ------------------AVVEIQEDDLSQTPTKKADESNGDSGDKDKDDRIMIKFPVGK
  40 Sequence7       ------------------APLTSFLSSAKSQSKEDQSTSNGNMTDLSAHDEGSITYASSM
  41 Sequence6       ----------------------------SKSETSISAVSSATKISLDAKPKN--------
  42                                                  .          .   .
  43
  44 Sequence0       NKLNSEASPSREAINGQREDTGDQQ-----------------------------------
  45 Sequence2       NKLNSAASSAQKNINGVPDKAGDDR-----------------------------------
  46 Sequence1       SELSPDTAGVVTTVEGAAKQQEHS------------------------------------
  47 Sequence3       ------------------------------------------------------------
  48 Sequence4       SPENSSTSGKHTEEVMQKNGKDSKKQEESMKAVKESKKEEPKTAEQNKKNDQATIDLFMG
  49 Sequence5       KKARKSSAGDEGSAKKKVSKEKKKHR----------------------------------
  50 Sequence7       DK----------------------------------------------------------
  51 Sequence6       ------------------------------------------------------------
  52
  53
  54 Sequence0       ----------------------GLLKAIQNDKLAFPGETLSDIPCKTEEEGVGCGGAGRR
  55 Sequence2       ----------------------GLPKARQKDELASPEEALSEVPCKTEAGGADSGGADRR
  56 Sequence1       --------------------------AAELCLLETP----SDITCHMEEEPGSPGDPKRT
  57 Sequence3       -----------------------------------------DCPLNGESETHLANGTLAL
  58 Sequence4       KKMETNKKDKPEVKTTAKDNKKDPLIAEDSKPKEVPKKETSKTGGKGKKEGAKPAEKSKK
  59 Sequence5       --------------------------KVGKKNKEHDQEAKPAEESIVLDDSDISDAEKEA
  60 Sequence7       ----------------------------------------CDQTESKDDLKMVPTSPNRK
  61 Sequence6       -----------------------------------------SPARKPRRTKAELEKEKKE
  62
  63
  64 Sequence0       GDSQECSPRSCPELTSGPRMCPRKEQDSWSEAGGILFKGKVPMVVLQDILAVRPPQIKSL
  65 Sequence2       GLTQRGSPQNCPKLTGDLSMWSEKDRDGWSEAGGILFKGKMPVVVLQDILALRPP-ARSP
  66 Sequence1       GDCQAGSLQSCPELTPGSRTCPTKELSSWSKAGDLLFIEKVPVVVLEDILATKPS-IASL
  67 Sequence3       EESTPNLPLSAKEECTVSLENKTVENTHFSELK-------------SDQLHQAAATSTSA
  68 Sequence4       EEKEDSTTKSKKEKADSPANNQKEQQIGVKKKTSEPEDASNSHKSVTAKKDSKKDEASTQ
  69 Sequence5       EKDEVKVTVDASDDKDQEHTEENDVKVEEKVEDQCDAEEPVKVVESTEIPEEKAAEVEKA
  70 Sequence7       QETPSKKCASRICIGLFSSPEVAVGVESISDCNSLNKLLKEECAYSTSTTSKESSEDEDS
  71 Sequence6       KEEQRKLRLEEIAKKKAEKDREKEEKRKAKELADKERAEKKRLENEERIKKEAEREKKRL
  72                          .                   .
  73
  74 Sequence0       PATPQGKNMTPESEVLESFPEEDSVLSHSSLSSPSSTSSPEGPPAPPKQHSSTSPFPTST
  75 Sequence2       PATPPSQAVPSESETPESSPEEDLALSHSSLSSSSPTSSPEGQSVPTKLHTGPSPFPAST
  76 Sequence1       PMMSLDRSVTSESEILESCPEDDSILSHSSTNSSSPTSSPEGPSTPPEHRGGRS--SPST
  77 Sequence3       SNFSPERVVKEDCNS----SADDDSASVSSSSSPVSLSSPDAQTG-SQFRNRSSPSTSTT
  78 Sequence4       VKSDNESPEAAEISMILSTSEANSSSSEHEMDADTDTAATDRPSAQKETRLNRKSLPEVT
  79 Sequence5       SDELTENETIVENTSTETKQNEQSNDAKKKVKDEAITPRRARLPRAASQKTSEAEPKNDE
  80 Sequence7       DTTLNQCHSVDSPKKRHVESDDNSHSRKKKIKKDPESDEKQKQLKELERKKAKEEKQRLK
  81 Sequence6       EKDMKEKQAREEREKKQKEKDDLKKQKEDEEKRKHEEKEKEQKAQEEREEKARLVIFVYF
  82                            .                 . .                 .
  83
  84 Sequence0       PLRR-ITKKFVKGSTEKNKLRLQRDQERLGKQLKLRAEREEKEKLKEEAKRAKEEAK---
  85 Sequence2       PVCR-ITKKLVRGSAEKNKMKLQRDKERLRRQLKLRAEKEEKEKLREEAKRAKEEAR---
  86 Sequence1       PACR-VAKNFVKGSTEKGRSKLHRDRE---------QQREEKEKLREEIRRAKEEAR---
  87 Sequence3       PTGK-VTAN--KTSADKNKTKD-KDKQR-------QAEKEERERAKKEARSAKKKKRQGL
  88 Sequence4       GAPKGLTPKQQRLMEQRKKAREEKEQKLAEERRLKQQDKEHREQQKKQERDEKEQQR---
  89 Sequence5       VTPKRSKSAKKTPTDKNSETKTPKNSKAVKADTPNSKAKQTAEGIKEPTEKVSKPTTGAL
  90 Sequence7       KEKRLQREEEKKRMIEEERQKRREEKRRLAEERLLEQEEEKKRKSEEKRRQQENRKE---
  91 Sequence6       LYQLPDLRQILFHKWTDSEEKDFEKFLKLLCDGKSNLAKEIKYLHEIKSRPPRCRGK---
  92                                   . :  ..             .:     .   .
  93
  94 Sequence0       -----KKKEEEKELKEKE-RREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKK-
  95 Sequence2       -----KKREEEKELKEKE-RREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKK-
  96 Sequence1       -----KKKEEEKELKEKE-RREKREKDEKEKAEKQRLKEEKRKERQEALEAKLEEKRKK-
  97 Sequence3       LKNLQRKRGKTSESSGKEYKKEKKEREDKEKAEKMKLKEEKKREKLEALEAKQEEKRKKD
  98 Sequence4       ------KLERDQKEQQRKMEKEEKERKRQAEVDSKNEEKRKRNEAKEEVQRKKDEERRKK
  99 Sequence5       DKMFAKIQTESKKKPDEAIEILKTPEKKSPKTEDSPMEVDQLEGSAVSTPATNAISVSIC
 100 Sequence7       ----ALRQEKEQKLKERQVMLEIKREQLAKEKEEKRLESDRKKKERQEAKDKLMEEKRKQ
 101 Sequence6       ---------REKPKKSEDECILIDPQLETALKEGARFKYFNFHTDYRPPFYGTNRKKSQ-
 102                          . .    .        .      :    :  . .            .
 103
 104 Sequence0       --------EEEKRLREEEK---------RIKAEKAEITRFFQKPKTPQAPKTLAGS-CGK
 105 Sequence2       --------EEEKRLREEEK---------RIKAEKAEITRFFQKPKTPQAPKTLAGS-CGK
 106 Sequence1       --------EEEKRLREEEKR--LREEEKRIKAEKAEITRFFQKPKTPQAPKTLAGS-CGK
 107 Sequence3       EEKR--QKEEEKRQKEEEKR--LKEEEKRVKAEKAEITRFFQKPKTPQAPKTFSRS-CGK
 108 Sequence4       EQER--EEAEQKKKRAAESFSKFFVPKQPKCGSGSNNTSYLEHEQSSCDSSKASSQ-TLA
 109 Sequence5       LD----DSNDEKRKQKTAQAFQSFFVKKPAQRDVKQSDDENSMDRQSVGDGNEAVP-RLA
 110 Sequence7       KEQDKLARQQEKRKKEEEKQKVENEELRKKQKERDTFAKFFIKAPKPESTKIAPAQGLKH
 111 Sequence6       -------FVNPKNPHAKDPDLDYDYDSGEDWEEEPEGEKISDDEKLSDEEDMDEEDEDGF
 112                          : *. :                 .             .
 113
 114 Sequence0       FAPFEIKEHMVLAPRRRTAFHPDLCSQLDQLLQQQSGEFS--------------------
 115 Sequence2       FAPFEIKEHMVLAPRCRTAFDQDLCDQLDQLLQQQSSEFS--------------------
 116 Sequence1       FAPFEIKEHMVLAPRCRAALDQDLCDQLDQLLQQQSVAST--------------------
 117 Sequence3       FAPFEIKKGMALAPLCRIDFEPEASEELDRFLQEQNSKIY--------------------
 118 Sequence4       FRPFQIKDDMLLAPIVRNSLGQEQRSQLDGLFRHRDEEADDEEEEEEQDIVRRKPPNRAN
 119 Sequence5       FMPFCVKGDMRLAPICRATLEEDRKKRLEKVLVDSPSAQEVS---------------RQG
 120 Sequence7       FPAFELKPGMTLAPTVSSAILDPTKFEEELQKQDFDRELSIQQLR-----------NSKG
 121 Sequence6       FVPHGYLSDDEENAARDPDDPEERHKLTEAELKERQEKFN--------------------
 122                 * ..         .              :    .
 123
 124 Sequence0       -FLKDLKG--RQPLRSGPTHVSTRNADIFNSDVVIVERG------------KGDGVPERR
 125 Sequence2       -FLQDLKS--RRPLRSGPTVVSNRNTDLSNSDVVIVESS------------KVDGVPERR
 126 Sequence1       -FLSDLKS--RLPLRSGPTRVCGHDTDIMNRDVVIVESS------------KVDGVSERK
 127 Sequence3       -FFDEIKK--RKPRKMGQTTVPTVNSFEVDDVQVLGESDPVLGSNMLEGHIKDIGVPERK
 128 Sequence4       LYLSELSSGRRKPLKMQRDVKLQRRTKDEEDDDDVQVIDYLSPAG----LPIEVEQPKQL
 129 Sequence5       LYLQQLKR--KDYVVGKCDRTWTAQDDEGDEDDVMIVDDN------VCHQIEVDPSAAPS
 130 Sequence7       IVSKSLRSNNKDANSDDYHMVAKHATNGQVFLVRNSKSSNTCQEAVMEITAAEEVQFRHQ
 131 Sequence6       ---RMRKKRLRKLVVHHEGPLYDADSEETDNLEKLNSENQ---------GQQDNEADRFD
 132                           :                           .
 133
 134 Sequence0       KFGRMKLLQFCENHRPAYWGTWNKKTALIRARDPWAQDTKLLDYEVDSDEEWEEEEPGES
 135 Sequence2       KFGRMKLLQFSENHRPAYWGTWNKKTTVIRPRDPWAQDRDLLDYEVDSDEEWEEEEPGES
 136 Sequence1       KFGRMKLLQFSENHRPAYWGTWNKKTAIIRPRNPWAQDKDLLDYEVDSDDEWEEEEPGES
 137 Sequence3       KFGRMKLLQFCENHRPAYWGTCNRRSRVINSRKPWAQDTGMLDYEVDSDEEWEEEEPGES
 138 Sequence4       TRMKAKYLHFADNRRPPYYGTWRKKSSSISARRPLAQDKVLFDYEVDSDCEWEEEEPGES
 139 Sequence5       RRYRAKFFLFEENRRPPYRGTWRKRSSQIKPRRPFIQDTKFFDYEVDSDDEWEEEEPGES
 140 Sequence7       EMVAIKFLQFHDNYRPAYFGTWRKSSKTISPRNPWRKDEKLVNYEYDSDGDWEEDDPGES
 141 Sequence6       WEGVHYLLEGSPDPLRDYSDNEIGSIDGIWNEIPSSEESQIENVQLDDDEEESLVDADDL
 142                        :    :    * ..       *  . *  ::  : : : *.* : .  :..:
 143
 144 Sequence0       LSHSEGDDDDDMGED-EDEDDGFFVPHGYLSEDEGVT-EECADPENHKVRQKLKAKEWDE
 145 Sequence2       LSHSEGDDDDDVGED-EDEDDGFFVPHGYLSEDEGVT-EECADPENHKVRQKLKAKEWDE
 146 Sequence1       LSHSEGDEDDDVGED-EDEDDGFFVPHGYLSEDEGVT-EECADPENHKVHQKLKAKEWDE
 147 Sequence3       LSHSEGENDDDPKED-DEDDDGFFVPHGYLSDDEGVSDEECTDPENQKFRQKLKAKEWYE
 148 Sequence4       LSASEDEKEKESEEESEEEYNEWYVPHGHLSDEELQNDGDGMEDGHTREAQKAKLQVLQQ
 149 Sequence5       LHGSDDEKDVDPEED-YEVDNDFFVPHGHLSDEEMQAEDDVME-DNSPETQKAKLKILQQ
 150 Sequence7       LSQSENEAESDEDED---DDDGFFVPHGYLSADEGVCSDENDGGNEGK---SLQPVTKAK
 151 Sequence6       NPSDEEDFVELENQAWDNSEMKNWTDFEKVRDELVKFTEECKECSMVTDVTKNES-----
 152                    .: :      :         :. .  :  :      :           . :
 153
 154 Sequence0       FLAKGKR--FRVLQPVKIGCVWAADRDC-------------AGDDLKVLQQFAACFLETL
 155 Sequence2       FLAKGKR--FRILQPVKIGCIWAADKD--------------GGADLKVLQQFTACLLETV
 156 Sequence1       LLAKGKR--FRVLQPVHVGCVWASEAANC------------TSSDLKLLQQFTACLLDVA
 157 Sequence3       LQTNGKK--IRAMQPVVIGCVWWDSKAS----------------EISLLQKFSACILESP
 158 Sequence4       EFAQEMKKQTKKIKARLLGPVWLDENGNKS--------ELFPAIFAHTIDMYACWQVEPL
 159 Sequence5       EFAAEMKKKTEKIKPRLIGCLWENGPDDEPECSPVIWEILKARAMLYDPDEPISFTVQKA
 160 Sequence7       TWEADIQRKCKQLQPLVIGCSWSSTGKS-----------------HYLLENCACKPLLDF
 161 Sequence6       --------------EVELEAIWSVEKKQ---------------------------RRKRT
 162                                  :   *
 163
 164 Sequence0       PAQEEQTPKASKRE---------RRDEQILAQLLPLLHGNVNGSKVIIREFQEHCRRGLL
 165 Sequence2       PPEEEQTPKASKRE---------KRDQQILAQLLPLLHGNVNGSKVIIREFQECCRRGLL
 166 Sequence1       SP-DEPEPGASRRE---------KRDQHILAQLLPLLHGNVNGSKVIIHEFQEQCRRGLL
 167 Sequence3       AVDEELAQEISSAQS--------LKDRQILSKLVPLLHGNVNGSKIMIQEFQEYCRRGLF
 168 Sequence4       SLEPPPEPERQDQTPEQ--PVPLQLDDRLMQQLVRLTHGNRNSKTFLINEYLEYLKTQAT
 169 Sequence5       EPESNNSSPSKEKEPIERKPKQVKLVDEGVKELITLIHGSALNRKFLIKEFLAYWAKRRD
 170 Sequence7       PINPDFQDTKSIKTS-----------EKHTSDQSNTKNGNSPAT-----------RRGRG
 171 Sequence6       RAHASKASVTNLRPS---------RYVDLTNMKLILTDGVQLGNGLPIDDFQGLEYPSKA
 172                           .                          .*
 173
 174 Sequence0       SNHTGSPR-------SPSTTYLHTPTPSEDAAIPSKSRLKRLISENSVYEKRPDFRMCWY
 175 Sequence2       SRDAGSPEDSAASPPSPGPARPQTPTASEDVAVPSKARLKRIISENSVYEKRPDFRMCWY
 176 Sequence1       TLPSPTPH-------------LQMPNLEDAVAVPSKARLKRLISENSAYEKRPNFRMCWY
 177 Sequence3       LEDNASDAAG-----NESTSPNVTPQTPSNIIVPSKARLKRLISENSVYEKRPDHRMCWY
 178 Sequence4       AEANQTTLPS-----KAVLREKFDELASWKTVELSTPEAAAASANSAKKGRKPKKRLCWV
 179 Sequence5       EGEVNAPQYG---------------QDSIRTKILEVASWRPCPDEGPMQN-----KMCWY
 180 Sequence7       GKEG-------------------------RVPEEALPDLIKLIHGSTNSLQRLIEEFRDF
 181 Sequence6       KDDDVVEALS----------------NVSLDENDTDSEKEETSNQEKGEEDTHKLKNNEI
 182                                                     .                  .
 183
 184 Sequence0       VHPQVLQSFQQEHLPVPCQWSYVTSVPSAPKEDSGSVPSTGP------------------
 185 Sequence2       VHPQVLKSFAQEHLPVPCQWSYVTAVPSATREDSGSVPAPGP------------------
 186 Sequence1       VHPEVLKSFGQECLPVPCQWTYITTMPSAPREDSGSASTEGP------------------
 187 Sequence3       VHSDVLKGLQQDNLPVPCQWTYITQVNSVAKEDNG--ANGGS------------------
 188 Sequence4       VASDMLEKFQLPDLQLQNQWNYTLTPKVSDGPDAAQQEQSPP------------------
 189 Sequence5       VNKEALVKYGLTDLKIPTGWEFILKPIIKSKREKKPKKDEEANGDDEGEKKPESKKESPK
 190 Sequence7       WYKKQSENEIKADLQPENSLKVASSAANSDLDSPKRKSDEIS------------------
 191 Sequence6       IHGDVIEILSSGEDANERGQESEDIPDTEDDEESLGESDSED------------------
 192                    .                            .
 193
 194 Sequence0       --------------------------------------------------SQGTPIS--L
 195 Sequence2       --------------------------------------------------GQGMPVS--L
 196 Sequence1       --------------------------------------------------GQSTPML--L
 197 Sequence3       --------------------------------------------------LQSLPLS--G
 198 Sequence4       --------------------------------------------------ADAVPAASPA
 199 Sequence5       DKEKNDRLQSTPSSATKSKPPTTPASSITKFTKKLSEDDKRKQFAKGRKSSTASPSSASK
 200 Sequence7       --------------------------------------------------GSTDITSNSN
 201 Sequence6       ----------------------------------------------------EETLEDPA
 202
 203
 204 Sequence0       KRKSAGSMCITQFMKKRRHDGQIGAEDMDGFQADTEEEEEEEGDCMIVDVPDAAEVQAPC
 205 Sequence2       KRKSAGSMCITQFMKKRRHDGQVGTGDLDDFQADTEEEDDDEGDCVIMDISDVGDIQAPC
 206 Sequence1       KRKPAATMCITQFMKKRRYDGQVGSGDMDGFQADTEEDEEDDTDCMIIDVPD--------
 207 Sequence3       KRKSAGSMPITKFMKRAKDLETAINTDMDGFQADNEEDDD---DCMILEDQQAKDAEDS-
 208 Sequence4       SNQTTNSAPTTPISGQTQAGQGVKKRATLIMSVPRDQPIPSATKNKLISQFLQRQSDASK
 209 Sequence5       KSATTAKLPVAAPSPSSDAKPAVKKRVQLLMSVPRGQSINQTTKSNLISQFLAKGSSDSN
 210 Sequence7       QVSPSHTSEIESYAISKRQIEVKILSMAQKERRDSDVKMHWYVDDTVLESFGLLEWSRTR
 211 Sequence6       DHDSIQCGFPDEEQDTEIQAGGKRKISPVAKRLDFGVATPKKGKNVEKQPSIVAIDSDSN
 212                 .  .                                       .    .
 213
 214 Sequence0       GAASGAGGGVGVDTGKATLTSSPLGAS-------
 215 Sequence2       GTTSGAGGSVGMDTSESFVSPSSLRLS-------
 216 Sequence1       ---------VGSDVSEAPIPAPTLCK--------
 217 Sequence3       ------TIECKINLNDSAVLASCQN---------
 218 Sequence4       PKEKMQEKPPPIVFDDVVMLSD------------
 219 Sequence5       KKHTSEAMEVDPPVASGNHGGQAAEPGEVIVLDE
 220 Sequence7       DRTNDGDNTPRVYIKKKKL---------------
 221 Sequence6       PAPIQETPKINILIPKKKKKKQES----------
 222                                .