1 package uk.ac.vamsas.objects.utils;
3 public class SymbolDictionary {
5 * defines standard names and properties for vamsas sequence dictionaries
7 static final public String STANDARD_AA="info:iubmb.org/aminoacids"; // strict 1 letter code
8 static final public String STANDARD_NA="info:iubmb.org/nucleosides";// strict 1 letter code (do not allow arbitrary rare nucleosides)
10 * TODO: Vamsas Dictionary properties interface
11 * an interface for dictionary provides :
12 * validation for a string
13 * symbolwidth (or symbol next/previous)
14 * mappings to certain other dictionaries (one2three, etc)