webservices/compbio/ws/server/resource/AAConWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/12/2010/" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="analize" type="tns:analize"/>
  15
  16   <xs:element name="analizeResponse" type="tns:analizeResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAnalize" type="tns:customAnalize"/>
  23
  24   <xs:element name="customAnalizeResponse" type="tns:customAnalizeResponse"/>
  25
  26   <xs:element name="getConservation" type="tns:getConservation"/>
  27
  28   <xs:element name="getConservationResponse" type="tns:getConservationResponse"/>
  29
  30   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  31
  32   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  33
  34   <xs:element name="getLimit" type="tns:getLimit"/>
  35
  36   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  37
  38   <xs:element name="getLimits" type="tns:getLimits"/>
  39
  40   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  41
  42   <xs:element name="getPresets" type="tns:getPresets"/>
  43
  44   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="presetAnalize" type="tns:presetAnalize"/>
  51
  52   <xs:element name="presetAnalizeResponse" type="tns:presetAnalizeResponse"/>
  53
  54   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  55
  56   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  57
  58   <xs:complexType name="getJobStatus">
  59     <xs:sequence>
  60       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
  61     </xs:sequence>
  62   </xs:complexType>
  63
  64   <xs:complexType name="getJobStatusResponse">
  65     <xs:sequence>
  66       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
  67     </xs:sequence>
  68   </xs:complexType>
  69
  70   <xs:complexType name="analize">
  71     <xs:sequence>
  72       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
  73     </xs:sequence>
  74   </xs:complexType>
  75
  76   <xs:complexType name="fastaSequence">
  77     <xs:sequence/>
  78   </xs:complexType>
  79
  80   <xs:complexType name="analizeResponse">
  81     <xs:sequence>
  82       <xs:element name="return" type="xs:string" minOccurs="0"/>
  83     </xs:sequence>
  84   </xs:complexType>
  85
  86   <xs:complexType name="UnsupportedRuntimeException">
  87     <xs:sequence>
  88       <xs:element name="message" type="xs:string" minOccurs="0"/>
  89     </xs:sequence>
  90   </xs:complexType>
  91
  92   <xs:complexType name="LimitExceededException">
  93     <xs:sequence>
  94       <xs:element name="actualNumberofSequences" type="xs:int"/>
  95       <xs:element name="message" type="xs:string" minOccurs="0"/>
  96       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
  97       <xs:element name="sequenceLenghtActual" type="xs:int"/>
  98       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
  99     </xs:sequence>
 100   </xs:complexType>
 101
 102   <xs:complexType name="JobSubmissionException">
 103     <xs:sequence>
 104       <xs:element name="message" type="xs:string" minOccurs="0"/>
 105     </xs:sequence>
 106   </xs:complexType>
 107
 108   <xs:complexType name="getRunnerOptions">
 109     <xs:sequence/>
 110   </xs:complexType>
 111
 112   <xs:complexType name="getRunnerOptionsResponse">
 113     <xs:sequence>
 114       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
 115     </xs:sequence>
 116   </xs:complexType>
 117
 118   <xs:complexType name="runnerConfig">
 119     <xs:sequence>
 120       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 121       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 122       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
 123       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 124     </xs:sequence>
 125   </xs:complexType>
 126
 127   <xs:complexType name="option">
 128     <xs:sequence>
 129       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
 130       <xs:element name="description" type="xs:string" minOccurs="0"/>
 131       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
 132       <xs:element name="name" type="xs:string" minOccurs="0"/>
 133       <xs:element name="required" type="xs:boolean"/>
 134     </xs:sequence>
 135   </xs:complexType>
 136
 137   <xs:complexType name="parameter">
 138     <xs:complexContent>
 139       <xs:extension base="tns:option">
 140         <xs:sequence>
 141           <xs:element name="optionName" type="xs:string" minOccurs="0"/>
 142           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 143         </xs:sequence>
 144       </xs:extension>
 145     </xs:complexContent>
 146   </xs:complexType>
 147
 148   <xs:complexType name="valueConstrain">
 149     <xs:sequence>
 150       <xs:element name="type" type="tns:type" minOccurs="0"/>
 151     </xs:sequence>
 152   </xs:complexType>
 153
 154   <xs:complexType name="presetAnalize">
 155     <xs:sequence>
 156       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 157       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
 158     </xs:sequence>
 159   </xs:complexType>
 160
 161   <xs:complexType name="preset">
 162     <xs:sequence>
 163       <xs:element name="description" type="xs:string" minOccurs="0"/>
 164       <xs:element name="name" type="xs:string" minOccurs="0"/>
 165       <xs:element name="options" type="xs:string" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 166     </xs:sequence>
 167   </xs:complexType>
 168
 169   <xs:complexType name="presetAnalizeResponse">
 170     <xs:sequence>
 171       <xs:element name="return" type="xs:string" minOccurs="0"/>
 172     </xs:sequence>
 173   </xs:complexType>
 174
 175   <xs:complexType name="WrongParameterException">
 176     <xs:sequence>
 177       <xs:element name="message" type="xs:string" minOccurs="0"/>
 178     </xs:sequence>
 179   </xs:complexType>
 180
 181   <xs:complexType name="getLimits">
 182     <xs:sequence/>
 183   </xs:complexType>
 184
 185   <xs:complexType name="getLimitsResponse">
 186     <xs:sequence>
 187       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 188     </xs:sequence>
 189   </xs:complexType>
 190
 191   <xs:complexType name="limitsManager">
 192     <xs:sequence/>
 193   </xs:complexType>
 194
 195   <xs:complexType name="getLimit">
 196     <xs:sequence>
 197       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 198     </xs:sequence>
 199   </xs:complexType>
 200
 201   <xs:complexType name="getLimitResponse">
 202     <xs:sequence>
 203       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 204     </xs:sequence>
 205   </xs:complexType>
 206
 207   <xs:complexType name="limit">
 208     <xs:sequence/>
 209   </xs:complexType>
 210
 211   <xs:complexType name="getPresets">
 212     <xs:sequence/>
 213   </xs:complexType>
 214
 215   <xs:complexType name="getPresetsResponse">
 216     <xs:sequence>
 217       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 218     </xs:sequence>
 219   </xs:complexType>
 220
 221   <xs:complexType name="presetManager">
 222     <xs:sequence>
 223       <xs:element name="presets" type="tns:preset" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 224       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 225     </xs:sequence>
 226   </xs:complexType>
 227
 228   <xs:complexType name="cancelJob">
 229     <xs:sequence>
 230       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 231     </xs:sequence>
 232   </xs:complexType>
 233
 234   <xs:complexType name="cancelJobResponse">
 235     <xs:sequence>
 236       <xs:element name="return" type="xs:boolean"/>
 237     </xs:sequence>
 238   </xs:complexType>
 239
 240   <xs:complexType name="customAnalize">
 241     <xs:sequence>
 242       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 243       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 244     </xs:sequence>
 245   </xs:complexType>
 246
 247   <xs:complexType name="customAnalizeResponse">
 248     <xs:sequence>
 249       <xs:element name="return" type="xs:string" minOccurs="0"/>
 250     </xs:sequence>
 251   </xs:complexType>
 252
 253   <xs:complexType name="getConservation">
 254     <xs:sequence>
 255       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 256     </xs:sequence>
 257   </xs:complexType>
 258
 259   <xs:complexType name="getConservationResponse">
 260     <xs:sequence>
 261       <xs:element name="return" type="tns:score" minOccurs="0" maxOccurs="unbounded"/>
 262     </xs:sequence>
 263   </xs:complexType>
 264
 265   <xs:complexType name="score">
 266     <xs:sequence>
 267       <xs:element name="method" type="tns:method" minOccurs="0"/>
 268       <xs:element name="scores" type="xs:float" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 269     </xs:sequence>
 270   </xs:complexType>
 271
 272   <xs:complexType name="ResultNotAvailableException">
 273     <xs:sequence>
 274       <xs:element name="message" type="xs:string" minOccurs="0"/>
 275     </xs:sequence>
 276   </xs:complexType>
 277
 278   <xs:complexType name="pullExecStatistics">
 279     <xs:sequence>
 280       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 281       <xs:element name="position" type="xs:long"/>
 282     </xs:sequence>
 283   </xs:complexType>
 284
 285   <xs:complexType name="pullExecStatisticsResponse">
 286     <xs:sequence>
 287       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 288     </xs:sequence>
 289   </xs:complexType>
 290
 291   <xs:complexType name="chunkHolder">
 292     <xs:sequence/>
 293   </xs:complexType>
 294
 295   <xs:simpleType name="jobStatus">
 296     <xs:restriction base="xs:string">
 297       <xs:enumeration value="PENDING"/>
 298       <xs:enumeration value="RUNNING"/>
 299       <xs:enumeration value="CANCELLED"/>
 300       <xs:enumeration value="FINISHED"/>
 301       <xs:enumeration value="FAILED"/>
 302       <xs:enumeration value="UNDEFINED"/>
 303       <xs:enumeration value="STARTED"/>
 304       <xs:enumeration value="SUBMITTED"/>
 305       <xs:enumeration value="COLLECTED"/>
 306     </xs:restriction>
 307   </xs:simpleType>
 308
 309   <xs:simpleType name="type">
 310     <xs:restriction base="xs:string">
 311       <xs:enumeration value="Integer"/>
 312       <xs:enumeration value="Float"/>
 313     </xs:restriction>
 314   </xs:simpleType>
 315
 316   <xs:simpleType name="method">
 317     <xs:restriction base="xs:string">
 318       <xs:enumeration value="KABAT"/>
 319       <xs:enumeration value="JORES"/>
 320       <xs:enumeration value="SCHNEIDER"/>
 321       <xs:enumeration value="SHENKIN"/>
 322       <xs:enumeration value="GERSTEIN"/>
 323       <xs:enumeration value="TAYLOR_GAPS"/>
 324       <xs:enumeration value="TAYLOR_NO_GAPS"/>
 325       <xs:enumeration value="ZVELIBIL"/>
 326       <xs:enumeration value="KARLIN"/>
 327       <xs:enumeration value="ARMON"/>
 328       <xs:enumeration value="THOMPSON"/>
 329       <xs:enumeration value="NOT_LANCET"/>
 330       <xs:enumeration value="MIRNY"/>
 331       <xs:enumeration value="WILLIAMSON"/>
 332       <xs:enumeration value="LANDGRAF"/>
 333       <xs:enumeration value="SANDER"/>
 334       <xs:enumeration value="VALDAR"/>
 335       <xs:enumeration value="SMERFS"/>
 336     </xs:restriction>
 337   </xs:simpleType>
 338 </xs:schema>
 339