webservices/compbio/ws/server/resource/RNAalifoldWS_schema1.xsd

   1 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
   2 <xs:schema version="1.0" targetNamespace="http://msa.data.compbio/01/12/2010/" xmlns:tns="http://msa.data.compbio/01/12/2010/" xmlns:xs="http://www.w3.org/2001/XMLSchema">
   3
   4   <xs:element name="JobSubmissionException" type="tns:JobSubmissionException"/>
   5
   6   <xs:element name="LimitExceededException" type="tns:LimitExceededException"/>
   7
   8   <xs:element name="ResultNotAvailableException" type="tns:ResultNotAvailableException"/>
   9
  10   <xs:element name="UnsupportedRuntimeException" type="tns:UnsupportedRuntimeException"/>
  11
  12   <xs:element name="WrongParameterException" type="tns:WrongParameterException"/>
  13
  14   <xs:element name="analize" type="tns:analize"/>
  15
  16   <xs:element name="analizeResponse" type="tns:analizeResponse"/>
  17
  18   <xs:element name="cancelJob" type="tns:cancelJob"/>
  19
  20   <xs:element name="cancelJobResponse" type="tns:cancelJobResponse"/>
  21
  22   <xs:element name="customAnalize" type="tns:customAnalize"/>
  23
  24   <xs:element name="customAnalizeResponse" type="tns:customAnalizeResponse"/>
  25
  26   <xs:element name="getAnnotation" type="tns:getAnnotation"/>
  27
  28   <xs:element name="getAnnotationResponse" type="tns:getAnnotationResponse"/>
  29
  30   <xs:element name="getJobStatus" type="tns:getJobStatus"/>
  31
  32   <xs:element name="getJobStatusResponse" type="tns:getJobStatusResponse"/>
  33
  34   <xs:element name="getLimit" type="tns:getLimit"/>
  35
  36   <xs:element name="getLimitResponse" type="tns:getLimitResponse"/>
  37
  38   <xs:element name="getLimits" type="tns:getLimits"/>
  39
  40   <xs:element name="getLimitsResponse" type="tns:getLimitsResponse"/>
  41
  42   <xs:element name="getPresets" type="tns:getPresets"/>
  43
  44   <xs:element name="getPresetsResponse" type="tns:getPresetsResponse"/>
  45
  46   <xs:element name="getRunnerOptions" type="tns:getRunnerOptions"/>
  47
  48   <xs:element name="getRunnerOptionsResponse" type="tns:getRunnerOptionsResponse"/>
  49
  50   <xs:element name="limits" type="tns:limitsManager"/>
  51
  52   <xs:element name="presetAnalize" type="tns:presetAnalize"/>
  53
  54   <xs:element name="presetAnalizeResponse" type="tns:presetAnalizeResponse"/>
  55
  56   <xs:element name="presets" type="tns:presetManager"/>
  57
  58   <xs:element name="pullExecStatistics" type="tns:pullExecStatistics"/>
  59
  60   <xs:element name="pullExecStatisticsResponse" type="tns:pullExecStatisticsResponse"/>
  61
  62   <xs:element name="runnerConfig" type="tns:runnerConfig"/>
  63
  64   <xs:complexType name="analize">
  65     <xs:sequence>
  66       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
  67     </xs:sequence>
  68   </xs:complexType>
  69
  70   <xs:complexType name="fastaSequence">
  71     <xs:sequence>
  72       <xs:element name="id" type="xs:string" minOccurs="0"/>
  73       <xs:element name="sequence" type="xs:string" minOccurs="0"/>
  74     </xs:sequence>
  75   </xs:complexType>
  76
  77   <xs:complexType name="analizeResponse">
  78     <xs:sequence>
  79       <xs:element name="return" type="xs:string" minOccurs="0"/>
  80     </xs:sequence>
  81   </xs:complexType>
  82
  83   <xs:complexType name="UnsupportedRuntimeException">
  84     <xs:sequence>
  85       <xs:element name="message" type="xs:string" minOccurs="0"/>
  86     </xs:sequence>
  87   </xs:complexType>
  88
  89   <xs:complexType name="LimitExceededException">
  90     <xs:sequence>
  91       <xs:element name="actualNumberofSequences" type="xs:int"/>
  92       <xs:element name="message" type="xs:string" minOccurs="0"/>
  93       <xs:element name="numberOfSequencesAllowed" type="xs:int"/>
  94       <xs:element name="sequenceLenghtActual" type="xs:int"/>
  95       <xs:element name="sequenceLenghtAllowed" type="xs:int"/>
  96     </xs:sequence>
  97   </xs:complexType>
  98
  99   <xs:complexType name="JobSubmissionException">
 100     <xs:sequence>
 101       <xs:element name="message" type="xs:string" minOccurs="0"/>
 102     </xs:sequence>
 103   </xs:complexType>
 104
 105   <xs:complexType name="getRunnerOptions">
 106     <xs:sequence/>
 107   </xs:complexType>
 108
 109   <xs:complexType name="getRunnerOptionsResponse">
 110     <xs:sequence>
 111       <xs:element name="return" type="tns:runnerConfig" minOccurs="0"/>
 112     </xs:sequence>
 113   </xs:complexType>
 114
 115   <xs:complexType name="runnerConfig">
 116     <xs:sequence>
 117       <xs:element name="options" type="tns:option" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 118       <xs:element name="parameters" type="tns:parameter" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 119       <xs:element name="prmSeparator" type="xs:string" minOccurs="0"/>
 120       <xs:element name="runnerClassName" type="xs:string"/>
 121     </xs:sequence>
 122   </xs:complexType>
 123
 124   <xs:complexType name="option">
 125     <xs:sequence>
 126       <xs:element name="description" type="xs:string"/>
 127       <xs:element name="optionNames" type="xs:string" maxOccurs="unbounded"/>
 128       <xs:element name="name" type="xs:string"/>
 129       <xs:element name="furtherDetails" type="xs:anyURI" minOccurs="0"/>
 130       <xs:element name="defaultValue" type="xs:string" minOccurs="0"/>
 131     </xs:sequence>
 132     <xs:attribute name="isRequired" type="xs:boolean" use="required"/>
 133   </xs:complexType>
 134
 135   <xs:complexType name="parameter">
 136     <xs:complexContent>
 137       <xs:extension base="tns:option">
 138         <xs:sequence>
 139           <xs:element name="possibleValues" type="xs:string" minOccurs="0" maxOccurs="unbounded"/>
 140           <xs:element name="validValue" type="tns:valueConstrain" minOccurs="0"/>
 141         </xs:sequence>
 142       </xs:extension>
 143     </xs:complexContent>
 144   </xs:complexType>
 145
 146   <xs:complexType name="valueConstrain">
 147     <xs:sequence>
 148       <xs:element name="type" type="tns:type"/>
 149       <xs:element name="max" type="xs:string" minOccurs="0"/>
 150       <xs:element name="min" type="xs:string" minOccurs="0"/>
 151     </xs:sequence>
 152   </xs:complexType>
 153
 154   <xs:complexType name="getJobStatus">
 155     <xs:sequence>
 156       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 157     </xs:sequence>
 158   </xs:complexType>
 159
 160   <xs:complexType name="getJobStatusResponse">
 161     <xs:sequence>
 162       <xs:element name="return" type="tns:jobStatus" minOccurs="0"/>
 163     </xs:sequence>
 164   </xs:complexType>
 165
 166   <xs:complexType name="getAnnotation">
 167     <xs:sequence>
 168       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 169     </xs:sequence>
 170   </xs:complexType>
 171
 172   <xs:complexType name="getAnnotationResponse">
 173     <xs:sequence>
 174       <xs:element name="return" type="tns:scoreManager" minOccurs="0"/>
 175     </xs:sequence>
 176   </xs:complexType>
 177
 178   <xs:complexType name="scoreManager">
 179     <xs:sequence>
 180       <xs:element name="seqScores" type="tns:scoreHolder" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 181     </xs:sequence>
 182   </xs:complexType>
 183
 184   <xs:complexType name="scoreHolder">
 185     <xs:sequence>
 186       <xs:element name="id" type="xs:string" minOccurs="0"/>
 187       <xs:element name="scores" type="tns:score" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 188     </xs:sequence>
 189   </xs:complexType>
 190
 191   <xs:complexType name="score">
 192     <xs:sequence>
 193       <xs:element name="method" type="xs:string" minOccurs="0"/>
 194       <xs:element name="ranges" type="tns:range" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 195       <xs:element name="scores" type="xs:float" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 196     </xs:sequence>
 197   </xs:complexType>
 198
 199   <xs:complexType name="range">
 200     <xs:sequence>
 201       <xs:element name="from" type="xs:int"/>
 202       <xs:element name="to" type="xs:int"/>
 203     </xs:sequence>
 204   </xs:complexType>
 205
 206   <xs:complexType name="ResultNotAvailableException">
 207     <xs:sequence>
 208       <xs:element name="message" type="xs:string" minOccurs="0"/>
 209     </xs:sequence>
 210   </xs:complexType>
 211
 212   <xs:complexType name="pullExecStatistics">
 213     <xs:sequence>
 214       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 215       <xs:element name="position" type="xs:long"/>
 216     </xs:sequence>
 217   </xs:complexType>
 218
 219   <xs:complexType name="pullExecStatisticsResponse">
 220     <xs:sequence>
 221       <xs:element name="return" type="tns:chunkHolder" minOccurs="0"/>
 222     </xs:sequence>
 223   </xs:complexType>
 224
 225   <xs:complexType name="chunkHolder">
 226     <xs:sequence>
 227       <xs:element name="chunk" type="xs:string" minOccurs="0"/>
 228       <xs:element name="position" type="xs:long"/>
 229     </xs:sequence>
 230   </xs:complexType>
 231
 232   <xs:complexType name="presetAnalize">
 233     <xs:sequence>
 234       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 235       <xs:element name="preset" type="tns:preset" minOccurs="0"/>
 236     </xs:sequence>
 237   </xs:complexType>
 238
 239   <xs:complexType name="preset">
 240     <xs:sequence>
 241       <xs:element name="name" type="xs:string"/>
 242       <xs:element name="description" type="xs:string" minOccurs="0"/>
 243       <xs:element name="optlist" minOccurs="0">
 244         <xs:complexType>
 245           <xs:sequence>
 246             <xs:element name="option" type="xs:string" maxOccurs="unbounded"/>
 247           </xs:sequence>
 248         </xs:complexType>
 249       </xs:element>
 250     </xs:sequence>
 251   </xs:complexType>
 252
 253   <xs:complexType name="presetAnalizeResponse">
 254     <xs:sequence>
 255       <xs:element name="return" type="xs:string" minOccurs="0"/>
 256     </xs:sequence>
 257   </xs:complexType>
 258
 259   <xs:complexType name="WrongParameterException">
 260     <xs:sequence>
 261       <xs:element name="message" type="xs:string" minOccurs="0"/>
 262     </xs:sequence>
 263   </xs:complexType>
 264
 265   <xs:complexType name="getLimits">
 266     <xs:sequence/>
 267   </xs:complexType>
 268
 269   <xs:complexType name="getLimitsResponse">
 270     <xs:sequence>
 271       <xs:element name="return" type="tns:limitsManager" minOccurs="0"/>
 272     </xs:sequence>
 273   </xs:complexType>
 274
 275   <xs:complexType name="limitsManager">
 276     <xs:sequence>
 277       <xs:element name="runnerClassName" type="xs:string" minOccurs="0"/>
 278       <xs:element name="limit" type="tns:limit" nillable="true" minOccurs="0" maxOccurs="unbounded"/>
 279     </xs:sequence>
 280   </xs:complexType>
 281
 282   <xs:complexType name="limit">
 283     <xs:sequence>
 284       <xs:element name="preset" type="xs:string" minOccurs="0"/>
 285       <xs:element name="seqNumber" type="xs:int"/>
 286       <xs:element name="seqLength" type="xs:int"/>
 287     </xs:sequence>
 288     <xs:attribute name="isDefault" type="xs:boolean" use="required"/>
 289   </xs:complexType>
 290
 291   <xs:complexType name="getPresets">
 292     <xs:sequence/>
 293   </xs:complexType>
 294
 295   <xs:complexType name="getPresetsResponse">
 296     <xs:sequence>
 297       <xs:element name="return" type="tns:presetManager" minOccurs="0"/>
 298     </xs:sequence>
 299   </xs:complexType>
 300
 301   <xs:complexType name="presetManager">
 302     <xs:sequence>
 303       <xs:element name="runnerClassName" type="xs:string"/>
 304       <xs:element name="preset" type="tns:preset" maxOccurs="unbounded"/>
 305     </xs:sequence>
 306   </xs:complexType>
 307
 308   <xs:complexType name="getLimit">
 309     <xs:sequence>
 310       <xs:element name="presetName" type="xs:string" minOccurs="0"/>
 311     </xs:sequence>
 312   </xs:complexType>
 313
 314   <xs:complexType name="getLimitResponse">
 315     <xs:sequence>
 316       <xs:element name="return" type="tns:limit" minOccurs="0"/>
 317     </xs:sequence>
 318   </xs:complexType>
 319
 320   <xs:complexType name="cancelJob">
 321     <xs:sequence>
 322       <xs:element name="jobId" type="xs:string" minOccurs="0"/>
 323     </xs:sequence>
 324   </xs:complexType>
 325
 326   <xs:complexType name="cancelJobResponse">
 327     <xs:sequence>
 328       <xs:element name="return" type="xs:boolean"/>
 329     </xs:sequence>
 330   </xs:complexType>
 331
 332   <xs:complexType name="customAnalize">
 333     <xs:sequence>
 334       <xs:element name="fastaSequences" type="tns:fastaSequence" minOccurs="0" maxOccurs="unbounded"/>
 335       <xs:element name="options" type="tns:option" minOccurs="0" maxOccurs="unbounded"/>
 336     </xs:sequence>
 337   </xs:complexType>
 338
 339   <xs:complexType name="customAnalizeResponse">
 340     <xs:sequence>
 341       <xs:element name="return" type="xs:string" minOccurs="0"/>
 342     </xs:sequence>
 343   </xs:complexType>
 344
 345   <xs:simpleType name="type">
 346     <xs:restriction base="xs:string">
 347       <xs:enumeration value="Integer"/>
 348       <xs:enumeration value="Float"/>
 349     </xs:restriction>
 350   </xs:simpleType>
 351
 352   <xs:simpleType name="jobStatus">
 353     <xs:restriction base="xs:string">
 354       <xs:enumeration value="PENDING"/>
 355       <xs:enumeration value="RUNNING"/>
 356       <xs:enumeration value="CANCELLED"/>
 357       <xs:enumeration value="FINISHED"/>
 358       <xs:enumeration value="FAILED"/>
 359       <xs:enumeration value="UNDEFINED"/>
 360       <xs:enumeration value="STARTED"/>
 361       <xs:enumeration value="SUBMITTED"/>
 362       <xs:enumeration value="COLLECTED"/>
 363     </xs:restriction>
 364   </xs:simpleType>
 365 </xs:schema>
 366