1 #ifndef _SRC_CLUSTAL_OMEGA_CONFIG_H
2 #define _SRC_CLUSTAL_OMEGA_CONFIG_H 1
4 /* src/clustal-omega-config.h. Generated automatically at end of configure. */
5 /* src/config.h. Generated from config.h.in by configure. */
6 /* src/config.h.in. Generated from configure.ac by autoheader. */
8 /* Define if building universal (internal helper macro) */
9 /* #undef AC_APPLE_UNIVERSAL_BUILD */
11 /* Let all files know they are being used inside Clustal Omega */
12 #ifndef CLUSTAL_OMEGA_CLUSTALO
13 #define CLUSTAL_OMEGA_CLUSTALO 1
16 /* This is a CYGWIN system */
19 /* This is a Darwin system */
22 /* Define to 1 if you have the <argtable2.h> header file. */
23 #ifndef CLUSTAL_OMEGA_HAVE_ARGTABLE2_H
24 #define CLUSTAL_OMEGA_HAVE_ARGTABLE2_H 1
27 /* Define to 1 if you have the <assert.h> header file. */
28 #ifndef CLUSTAL_OMEGA_HAVE_ASSERT_H
29 #define CLUSTAL_OMEGA_HAVE_ASSERT_H 1
32 /* Define to 1 if you have the <ctype.h> header file. */
33 #ifndef CLUSTAL_OMEGA_HAVE_CTYPE_H
34 #define CLUSTAL_OMEGA_HAVE_CTYPE_H 1
37 /* Define to 1 if you have the <dlfcn.h> header file. */
38 #ifndef CLUSTAL_OMEGA_HAVE_DLFCN_H
39 #define CLUSTAL_OMEGA_HAVE_DLFCN_H 1
42 /* Define to 1 if you have the <float.h> header file. */
43 #ifndef CLUSTAL_OMEGA_HAVE_FLOAT_H
44 #define CLUSTAL_OMEGA_HAVE_FLOAT_H 1
47 /* Define to 1 if you have the `fseek64' function. */
48 /* #undef HAVE_FSEEK64 */
50 /* Define to 1 if you have the `fseeko' function. */
51 #ifndef CLUSTAL_OMEGA_HAVE_FSEEKO
52 #define CLUSTAL_OMEGA_HAVE_FSEEKO 1
55 /* Define to 1 if you have the `fseeko64' function. */
56 #ifndef CLUSTAL_OMEGA_HAVE_FSEEKO64
57 #define CLUSTAL_OMEGA_HAVE_FSEEKO64 1
60 /* Define to 1 if you have the `ftell64' function. */
61 /* #undef HAVE_FTELL64 */
63 /* Define to 1 if you have the `ftello' function. */
64 #ifndef CLUSTAL_OMEGA_HAVE_FTELLO
65 #define CLUSTAL_OMEGA_HAVE_FTELLO 1
68 /* Define to 1 if you have the `ftello64' function. */
69 #ifndef CLUSTAL_OMEGA_HAVE_FTELLO64
70 #define CLUSTAL_OMEGA_HAVE_FTELLO64 1
73 /* Define to 1 if you have the <inttypes.h> header file. */
74 #ifndef CLUSTAL_OMEGA_HAVE_INTTYPES_H
75 #define CLUSTAL_OMEGA_HAVE_INTTYPES_H 1
78 /* Define to 1 if you have the `argtable2' library (-largtable2). */
79 #ifndef CLUSTAL_OMEGA_HAVE_LIBARGTABLE2
80 #define CLUSTAL_OMEGA_HAVE_LIBARGTABLE2 1
83 /* Define to 1 if you have the `m' library (-lm). */
84 #ifndef CLUSTAL_OMEGA_HAVE_LIBM
85 #define CLUSTAL_OMEGA_HAVE_LIBM 1
88 /* Define to 1 if you have the <limits.h> header file. */
89 #ifndef CLUSTAL_OMEGA_HAVE_LIMITS_H
90 #define CLUSTAL_OMEGA_HAVE_LIMITS_H 1
94 #ifndef CLUSTAL_OMEGA_HAVE_LOG2
95 #define CLUSTAL_OMEGA_HAVE_LOG2 1
98 /* Define to 1 if you have the <math.h> header file. */
99 #ifndef CLUSTAL_OMEGA_HAVE_MATH_H
100 #define CLUSTAL_OMEGA_HAVE_MATH_H 1
103 /* Define to 1 if you have the <memory.h> header file. */
104 #ifndef CLUSTAL_OMEGA_HAVE_MEMORY_H
105 #define CLUSTAL_OMEGA_HAVE_MEMORY_H 1
108 /* Define to 1 if you have the `ntohl' function. */
109 #ifndef CLUSTAL_OMEGA_HAVE_NTOHL
110 #define CLUSTAL_OMEGA_HAVE_NTOHL 1
113 /* Define to 1 if you have the `ntohs' function. */
114 #ifndef CLUSTAL_OMEGA_HAVE_NTOHS
115 #define CLUSTAL_OMEGA_HAVE_NTOHS 1
118 /* Define to 1 if you have the `ntonl' function. */
119 /* #undef HAVE_NTONL */
121 /* Define to 1 if you have the `ntons' function. */
122 /* #undef HAVE_NTONS */
124 /* Defined if OpenMP should and can be used */
125 #ifndef CLUSTAL_OMEGA_HAVE_OPENMP
126 #define CLUSTAL_OMEGA_HAVE_OPENMP 1
129 /* Define to 1 if you have the <stdarg.h> header file. */
130 #ifndef CLUSTAL_OMEGA_HAVE_STDARG_H
131 #define CLUSTAL_OMEGA_HAVE_STDARG_H 1
134 /* Define to 1 if you have the <stdint.h> header file. */
135 #ifndef CLUSTAL_OMEGA_HAVE_STDINT_H
136 #define CLUSTAL_OMEGA_HAVE_STDINT_H 1
139 /* Define to 1 if you have the <stdio.h> header file. */
140 #ifndef CLUSTAL_OMEGA_HAVE_STDIO_H
141 #define CLUSTAL_OMEGA_HAVE_STDIO_H 1
144 /* Define to 1 if you have the <stdlib.h> header file. */
145 #ifndef CLUSTAL_OMEGA_HAVE_STDLIB_H
146 #define CLUSTAL_OMEGA_HAVE_STDLIB_H 1
149 /* Define to 1 if you have the <strings.h> header file. */
150 #ifndef CLUSTAL_OMEGA_HAVE_STRINGS_H
151 #define CLUSTAL_OMEGA_HAVE_STRINGS_H 1
154 /* Define to 1 if you have the <string.h> header file. */
155 #ifndef CLUSTAL_OMEGA_HAVE_STRING_H
156 #define CLUSTAL_OMEGA_HAVE_STRING_H 1
159 /* Define to 1 if you have the `stroul' function. */
160 /* #undef HAVE_STROUL */
162 /* Define to 1 if you have the `strtoull' function. */
163 #ifndef CLUSTAL_OMEGA_HAVE_STRTOULL
164 #define CLUSTAL_OMEGA_HAVE_STRTOULL 1
167 /* Define to 1 if you have the <sys/stat.h> header file. */
168 #ifndef CLUSTAL_OMEGA_HAVE_SYS_STAT_H
169 #define CLUSTAL_OMEGA_HAVE_SYS_STAT_H 1
172 /* Define to 1 if you have the <sys/types.h> header file. */
173 #ifndef CLUSTAL_OMEGA_HAVE_SYS_TYPES_H
174 #define CLUSTAL_OMEGA_HAVE_SYS_TYPES_H 1
177 /* Define to 1 if you have the <time.h> header file. */
178 #ifndef CLUSTAL_OMEGA_HAVE_TIME_H
179 #define CLUSTAL_OMEGA_HAVE_TIME_H 1
182 /* Define to 1 if you have the <unistd.h> header file. */
183 #ifndef CLUSTAL_OMEGA_HAVE_UNISTD_H
184 #define CLUSTAL_OMEGA_HAVE_UNISTD_H 1
187 /* This is a LINUX system */
188 #ifndef CLUSTAL_OMEGA_LINUX
189 #define CLUSTAL_OMEGA_LINUX 1
192 /* Define to the sub-directory in which libtool stores uninstalled libraries.
194 #ifndef CLUSTAL_OMEGA_LT_OBJDIR
195 #define CLUSTAL_OMEGA_LT_OBJDIR ".libs/"
198 /* This is a MinGW system */
202 #ifndef CLUSTAL_OMEGA_NDEBUG
203 #define CLUSTAL_OMEGA_NDEBUG /**/
206 /* Some strange OS */
209 /* Name of package */
210 #ifndef CLUSTAL_OMEGA_PACKAGE
211 #define CLUSTAL_OMEGA_PACKAGE "clustal-omega"
214 /* Define to the address where bug reports for this package should be sent. */
215 #ifndef CLUSTAL_OMEGA_PACKAGE_BUGREPORT
216 #define CLUSTAL_OMEGA_PACKAGE_BUGREPORT "clustalw@ucd.ie"
219 /* The package code name */
220 #ifndef CLUSTAL_OMEGA_PACKAGE_CODENAME
221 #define CLUSTAL_OMEGA_PACKAGE_CODENAME "DeshilHollesEamus"
224 /* Define to the full name of this package. */
225 #ifndef CLUSTAL_OMEGA_PACKAGE_NAME
226 #define CLUSTAL_OMEGA_PACKAGE_NAME "Clustal Omega"
229 /* Define to the full name and version of this package. */
230 #ifndef CLUSTAL_OMEGA_PACKAGE_STRING
231 #define CLUSTAL_OMEGA_PACKAGE_STRING "Clustal Omega 1.0.2"
234 /* Define to the one symbol short name of this package. */
235 #ifndef CLUSTAL_OMEGA_PACKAGE_TARNAME
236 #define CLUSTAL_OMEGA_PACKAGE_TARNAME "clustal-omega"
239 /* Define to the version of this package. */
240 #ifndef CLUSTAL_OMEGA_PACKAGE_VERSION
241 #define CLUSTAL_OMEGA_PACKAGE_VERSION "1.0.2"
244 /* The size of `fpos_t', as computed by sizeof. */
245 #ifndef CLUSTAL_OMEGA_SIZEOF_FPOS_T
246 #define CLUSTAL_OMEGA_SIZEOF_FPOS_T 16
249 /* The size of `unsigned int', as computed by sizeof. */
250 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT
251 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_INT 4
254 /* The size of `unsigned long', as computed by sizeof. */
255 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG
256 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG 8
259 /* The size of `unsigned long long', as computed by sizeof. */
260 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG
261 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_LONG_LONG 8
264 /* The size of `unsigned short', as computed by sizeof. */
265 #ifndef CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT
266 #define CLUSTAL_OMEGA_SIZEOF_UNSIGNED_SHORT 2
269 /* This is a Solaris system */
272 /* This is a BSD system */
275 /* Define to 1 if you have the ANSI C header files. */
276 #ifndef CLUSTAL_OMEGA_STDC_HEADERS
277 #define CLUSTAL_OMEGA_STDC_HEADERS 1
280 /* Enable extensions on AIX 3, Interix. */
282 # define _ALL_SOURCE 1
284 /* Enable GNU extensions on systems that have them. */
286 # define _GNU_SOURCE 1
288 /* Enable threading extensions on Solaris. */
289 #ifndef _POSIX_PTHREAD_SEMANTICS
290 # define _POSIX_PTHREAD_SEMANTICS 1
292 /* Enable extensions on HP NonStop. */
293 #ifndef _TANDEM_SOURCE
294 # define _TANDEM_SOURCE 1
296 /* Enable general extensions on Solaris. */
297 #ifndef __EXTENSIONS__
298 # define __EXTENSIONS__ 1
302 /* Version number of package */
303 #ifndef CLUSTAL_OMEGA_VERSION
304 #define CLUSTAL_OMEGA_VERSION "1.0.2"
307 /* Define if using the dmalloc debugging malloc package */
308 /* #undef WITH_DMALLOC */
310 /* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most
311 significant byte first (like Motorola and SPARC, unlike Intel). */
312 #if defined AC_APPLE_UNIVERSAL_BUILD
313 # if defined __BIG_ENDIAN__
314 # define WORDS_BIGENDIAN 1
317 # ifndef WORDS_BIGENDIAN
318 /* # undef WORDS_BIGENDIAN */
322 /* Define to 1 if on MINIX. */
325 /* Define to 2 if the system does not provide POSIX.1 features except with
327 /* #undef _POSIX_1_SOURCE */
329 /* Define to 1 if you need to in order for `stat' and other things to work. */
330 /* #undef _POSIX_SOURCE */
332 /* Define to empty if `const' does not conform to ANSI C. */
335 /* Define to `__inline__' or `__inline' if that's what the C compiler
336 calls it, or to nothing if 'inline' is not supported under any name. */
341 /* Define to `long int' if <sys/types.h> does not define. */
344 /* Define to `unsigned int' if <sys/types.h> does not define. */
347 /* once: _SRC_CLUSTAL_OMEGA_CONFIG_H */