website/docs/full_javadoc/compbio/data/msa/Category.html

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   6 <title>Category</title>
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  95 <div class="subTitle">compbio.data.msa</div>
  96 <h2 title="Class Category" class="title">Class Category</h2>
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  99 <ul class="inheritance">
 100 <li>java.lang.Object</li>
 101 <li>
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 103 <li>compbio.data.msa.Category</li>
 104 </ul>
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 107 <div class="description">
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 111 <br>
 112 <pre>public class <span class="typeNameLabel">Category</span>
 113 extends java.lang.Object</pre>
 114 </li>
 115 </ul>
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 117 <div class="summary">
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 126 <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Field Summary table, listing fields, and an explanation">
 127 <caption><span>Fields</span><span class="tabEnd">&nbsp;</span></caption>
 128 <tr>
 129 <th class="colFirst" scope="col">Modifier and Type</th>
 130 <th class="colLast" scope="col">Field and Description</th>
 131 </tr>
 132 <tr class="altColor">
 133 <td class="colFirst"><code>static java.lang.String</code></td>
 134 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#CATEGORY_ALIGNMENT">CATEGORY_ALIGNMENT</a></span></code>
 135 <div class="block">All of the Category names</div>
 136 </td>
 137 </tr>
 138 <tr class="rowColor">
 139 <td class="colFirst"><code>static java.lang.String</code></td>
 140 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#CATEGORY_CONSERVATION">CATEGORY_CONSERVATION</a></span></code>&nbsp;</td>
 141 </tr>
 142 <tr class="altColor">
 143 <td class="colFirst"><code>static java.lang.String</code></td>
 144 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#CATEGORY_DISORDER">CATEGORY_DISORDER</a></span></code>&nbsp;</td>
 145 </tr>
 146 <tr class="rowColor">
 147 <td class="colFirst"><code>static java.lang.String</code></td>
 148 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#CATEGORY_PREDICTION">CATEGORY_PREDICTION</a></span></code>&nbsp;</td>
 149 </tr>
 150 <tr class="altColor">
 151 <td class="colFirst"><code>java.lang.String</code></td>
 152 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#name">name</a></span></code>&nbsp;</td>
 153 </tr>
 154 <tr class="rowColor">
 155 <td class="colFirst"><code>(package private) java.util.Set&lt;<a href="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</a>&gt;</code></td>
 156 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#services">services</a></span></code>&nbsp;</td>
 157 </tr>
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 169 <tr>
 170 <th class="colFirst" scope="col">Modifier</th>
 171 <th class="colLast" scope="col">Constructor and Description</th>
 172 </tr>
 173 <tr class="altColor">
 174 <td class="colFirst"><code>private </code></td>
 175 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#Category--">Category</a></span>()</code>&nbsp;</td>
 176 </tr>
 177 <tr class="rowColor">
 178 <td class="colFirst"><code>private </code></td>
 179 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#Category-java.lang.String-java.util.Set-">Category</a></span>(java.lang.String&nbsp;name,
 180         java.util.Set&lt;<a href="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</a>&gt;&nbsp;services)</code>&nbsp;</td>
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 192 <caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd">&nbsp;</span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd">&nbsp;</span></span></caption>
 193 <tr>
 194 <th class="colFirst" scope="col">Modifier and Type</th>
 195 <th class="colLast" scope="col">Method and Description</th>
 196 </tr>
 197 <tr id="i0" class="altColor">
 198 <td class="colFirst"><code>boolean</code></td>
 199 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#equals-java.lang.Object-">equals</a></span>(java.lang.Object&nbsp;obj)</code>&nbsp;</td>
 200 </tr>
 201 <tr id="i1" class="rowColor">
 202 <td class="colFirst"><code>static java.util.Set&lt;<a href="../../../compbio/data/msa/Category.html" title="class in compbio.data.msa">Category</a>&gt;</code></td>
 203 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#getCategories--">getCategories</a></span>()</code>&nbsp;</td>
 204 </tr>
 205 <tr id="i2" class="altColor">
 206 <td class="colFirst"><code>java.util.Set&lt;<a href="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</a>&gt;</code></td>
 207 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#getServices--">getServices</a></span>()</code>&nbsp;</td>
 208 </tr>
 209 <tr id="i3" class="rowColor">
 210 <td class="colFirst"><code>int</code></td>
 211 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#hashCode--">hashCode</a></span>()</code>&nbsp;</td>
 212 </tr>
 213 <tr id="i4" class="altColor">
 214 <td class="colFirst"><code>private static java.util.Set&lt;<a href="../../../compbio/data/msa/Category.html" title="class in compbio.data.msa">Category</a>&gt;</code></td>
 215 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/msa/Category.html#init--">init</a></span>()</code>&nbsp;</td>
 216 </tr>
 217 </table>
 218 <ul class="blockList">
 219 <li class="blockList"><a name="methods.inherited.from.class.java.lang.Object">
 220 <!--   -->
 221 </a>
 222 <h3>Methods inherited from class&nbsp;java.lang.Object</h3>
 223 <code>clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait</code></li>
 224 </ul>
 225 </li>
 226 </ul>
 227 </li>
 228 </ul>
 229 </div>
 230 <div class="details">
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 233 <!-- ============ FIELD DETAIL =========== -->
 234 <ul class="blockList">
 235 <li class="blockList"><a name="field.detail">
 236 <!--   -->
 237 </a>
 238 <h3>Field Detail</h3>
 239 <a name="CATEGORY_ALIGNMENT">
 240 <!--   -->
 241 </a>
 242 <ul class="blockList">
 243 <li class="blockList">
 244 <h4>CATEGORY_ALIGNMENT</h4>
 245 <pre>public static final&nbsp;java.lang.String CATEGORY_ALIGNMENT</pre>
 246 <div class="block">All of the Category names</div>
 247 <dl>
 248 <dt><span class="seeLabel">See Also:</span></dt>
 249 <dd><a href="../../../constant-values.html#compbio.data.msa.Category.CATEGORY_ALIGNMENT">Constant Field Values</a></dd>
 250 </dl>
 251 </li>
 252 </ul>
 253 <a name="CATEGORY_DISORDER">
 254 <!--   -->
 255 </a>
 256 <ul class="blockList">
 257 <li class="blockList">
 258 <h4>CATEGORY_DISORDER</h4>
 259 <pre>public static final&nbsp;java.lang.String CATEGORY_DISORDER</pre>
 260 <dl>
 261 <dt><span class="seeLabel">See Also:</span></dt>
 262 <dd><a href="../../../constant-values.html#compbio.data.msa.Category.CATEGORY_DISORDER">Constant Field Values</a></dd>
 263 </dl>
 264 </li>
 265 </ul>
 266 <a name="CATEGORY_CONSERVATION">
 267 <!--   -->
 268 </a>
 269 <ul class="blockList">
 270 <li class="blockList">
 271 <h4>CATEGORY_CONSERVATION</h4>
 272 <pre>public static final&nbsp;java.lang.String CATEGORY_CONSERVATION</pre>
 273 <dl>
 274 <dt><span class="seeLabel">See Also:</span></dt>
 275 <dd><a href="../../../constant-values.html#compbio.data.msa.Category.CATEGORY_CONSERVATION">Constant Field Values</a></dd>
 276 </dl>
 277 </li>
 278 </ul>
 279 <a name="CATEGORY_PREDICTION">
 280 <!--   -->
 281 </a>
 282 <ul class="blockList">
 283 <li class="blockList">
 284 <h4>CATEGORY_PREDICTION</h4>
 285 <pre>public static final&nbsp;java.lang.String CATEGORY_PREDICTION</pre>
 286 <dl>
 287 <dt><span class="seeLabel">See Also:</span></dt>
 288 <dd><a href="../../../constant-values.html#compbio.data.msa.Category.CATEGORY_PREDICTION">Constant Field Values</a></dd>
 289 </dl>
 290 </li>
 291 </ul>
 292 <a name="name">
 293 <!--   -->
 294 </a>
 295 <ul class="blockList">
 296 <li class="blockList">
 297 <h4>name</h4>
 298 <pre>public&nbsp;java.lang.String name</pre>
 299 </li>
 300 </ul>
 301 <a name="services">
 302 <!--   -->
 303 </a>
 304 <ul class="blockListLast">
 305 <li class="blockList">
 306 <h4>services</h4>
 307 <pre>java.util.Set&lt;<a href="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</a>&gt; services</pre>
 308 </li>
 309 </ul>
 310 </li>
 311 </ul>
 312 <!-- ========= CONSTRUCTOR DETAIL ======== -->
 313 <ul class="blockList">
 314 <li class="blockList"><a name="constructor.detail">
 315 <!--   -->
 316 </a>
 317 <h3>Constructor Detail</h3>
 318 <a name="Category-java.lang.String-java.util.Set-">
 319 <!--   -->
 320 </a>
 321 <ul class="blockList">
 322 <li class="blockList">
 323 <h4>Category</h4>
 324 <pre>private&nbsp;Category(java.lang.String&nbsp;name,
 325                  java.util.Set&lt;<a href="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</a>&gt;&nbsp;services)</pre>
 326 </li>
 327 </ul>
 328 <a name="Category--">
 329 <!--   -->
 330 </a>
 331 <ul class="blockListLast">
 332 <li class="blockList">
 333 <h4>Category</h4>
 334 <pre>private&nbsp;Category()</pre>
 335 </li>
 336 </ul>
 337 </li>
 338 </ul>
 339 <!-- ============ METHOD DETAIL ========== -->
 340 <ul class="blockList">
 341 <li class="blockList"><a name="method.detail">
 342 <!--   -->
 343 </a>
 344 <h3>Method Detail</h3>
 345 <a name="getServices--">
 346 <!--   -->
 347 </a>
 348 <ul class="blockList">
 349 <li class="blockList">
 350 <h4>getServices</h4>
 351 <pre>public&nbsp;java.util.Set&lt;<a href="../../../compbio/ws/client/Services.html" title="enum in compbio.ws.client">Services</a>&gt;&nbsp;getServices()</pre>
 352 </li>
 353 </ul>
 354 <a name="getCategories--">
 355 <!--   -->
 356 </a>
 357 <ul class="blockList">
 358 <li class="blockList">
 359 <h4>getCategories</h4>
 360 <pre>public static&nbsp;java.util.Set&lt;<a href="../../../compbio/data/msa/Category.html" title="class in compbio.data.msa">Category</a>&gt;&nbsp;getCategories()</pre>
 361 </li>
 362 </ul>
 363 <a name="init--">
 364 <!--   -->
 365 </a>
 366 <ul class="blockList">
 367 <li class="blockList">
 368 <h4>init</h4>
 369 <pre>private static&nbsp;java.util.Set&lt;<a href="../../../compbio/data/msa/Category.html" title="class in compbio.data.msa">Category</a>&gt;&nbsp;init()</pre>
 370 </li>
 371 </ul>
 372 <a name="hashCode--">
 373 <!--   -->
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 375 <ul class="blockList">
 376 <li class="blockList">
 377 <h4>hashCode</h4>
 378 <pre>public&nbsp;int&nbsp;hashCode()</pre>
 379 <dl>
 380 <dt><span class="overrideSpecifyLabel">Overrides:</span></dt>
 381 <dd><code>hashCode</code>&nbsp;in class&nbsp;<code>java.lang.Object</code></dd>
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 384 </ul>
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 386 <!--   -->
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 388 <ul class="blockListLast">
 389 <li class="blockList">
 390 <h4>equals</h4>
 391 <pre>public&nbsp;boolean&nbsp;equals(java.lang.Object&nbsp;obj)</pre>
 392 <dl>
 393 <dt><span class="overrideSpecifyLabel">Overrides:</span></dt>
 394 <dd><code>equals</code>&nbsp;in class&nbsp;<code>java.lang.Object</code></dd>
 395 </dl>
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 415 <li><a href="package-summary.html">Package</a></li>
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