JWS-109 & JWS-116 Regenerated the JABAWS JavaDoc (with eclipse java 8) and moved...
[jabaws.git] / website / docs / full_javadoc / compbio / data / sequence / GlobProtResult.html
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
2 <!-- NewPage -->
3 <html lang="en">
4 <head>
5 <!-- Generated by javadoc (1.8.0_121) on Fri Apr 21 15:32:49 BST 2017 -->
6 <title>GlobProtResult</title>
7 <meta name="date" content="2017-04-21">
8 <link rel="stylesheet" type="text/css" href="../../../stylesheet.css" title="Style">
9 <script type="text/javascript" src="../../../script.js"></script>
10 </head>
11 <body>
12 <script type="text/javascript"><!--
13     try {
14         if (location.href.indexOf('is-external=true') == -1) {
15             parent.document.title="GlobProtResult";
16         }
17     }
18     catch(err) {
19     }
20 //-->
21 var methods = {"i0":9,"i1":9};
22 var tabs = {65535:["t0","All Methods"],1:["t1","Static Methods"],8:["t4","Concrete Methods"]};
23 var altColor = "altColor";
24 var rowColor = "rowColor";
25 var tableTab = "tableTab";
26 var activeTableTab = "activeTableTab";
27 </script>
28 <noscript>
29 <div>JavaScript is disabled on your browser.</div>
30 </noscript>
31 <!-- ========= START OF TOP NAVBAR ======= -->
32 <div class="topNav"><a name="navbar.top">
33 <!--   -->
34 </a>
35 <div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
36 <a name="navbar.top.firstrow">
37 <!--   -->
38 </a>
39 <ul class="navList" title="Navigation">
40 <li><a href="../../../overview-summary.html">Overview</a></li>
41 <li><a href="package-summary.html">Package</a></li>
42 <li class="navBarCell1Rev">Class</li>
43 <li><a href="class-use/GlobProtResult.html">Use</a></li>
44 <li><a href="package-tree.html">Tree</a></li>
45 <li><a href="../../../deprecated-list.html">Deprecated</a></li>
46 <li><a href="../../../index-files/index-1.html">Index</a></li>
47 <li><a href="../../../help-doc.html">Help</a></li>
48 </ul>
49 </div>
50 <div class="subNav">
51 <ul class="navList">
52 <li><a href="../../../compbio/data/sequence/FastaSequence.html" title="class in compbio.data.sequence"><span class="typeNameLink">Prev&nbsp;Class</span></a></li>
53 <li><a href="../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence"><span class="typeNameLink">Next&nbsp;Class</span></a></li>
54 </ul>
55 <ul class="navList">
56 <li><a href="../../../index.html?compbio/data/sequence/GlobProtResult.html" target="_top">Frames</a></li>
57 <li><a href="GlobProtResult.html" target="_top">No&nbsp;Frames</a></li>
58 </ul>
59 <ul class="navList" id="allclasses_navbar_top">
60 <li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
61 </ul>
62 <div>
63 <script type="text/javascript"><!--
64   allClassesLink = document.getElementById("allclasses_navbar_top");
65   if(window==top) {
66     allClassesLink.style.display = "block";
67   }
68   else {
69     allClassesLink.style.display = "none";
70   }
71   //-->
72 </script>
73 </div>
74 <div>
75 <ul class="subNavList">
76 <li>Summary:&nbsp;</li>
77 <li>Nested&nbsp;|&nbsp;</li>
78 <li><a href="#enum.constant.summary">Enum Constants</a>&nbsp;|&nbsp;</li>
79 <li>Field&nbsp;|&nbsp;</li>
80 <li><a href="#method.summary">Method</a></li>
81 </ul>
82 <ul class="subNavList">
83 <li>Detail:&nbsp;</li>
84 <li><a href="#enum.constant.detail">Enum Constants</a>&nbsp;|&nbsp;</li>
85 <li>Field&nbsp;|&nbsp;</li>
86 <li><a href="#method.detail">Method</a></li>
87 </ul>
88 </div>
89 <a name="skip.navbar.top">
90 <!--   -->
91 </a></div>
92 <!-- ========= END OF TOP NAVBAR ========= -->
93 <!-- ======== START OF CLASS DATA ======== -->
94 <div class="header">
95 <div class="subTitle">compbio.data.sequence</div>
96 <h2 title="Enum GlobProtResult" class="title">Enum GlobProtResult</h2>
97 </div>
98 <div class="contentContainer">
99 <ul class="inheritance">
100 <li>java.lang.Object</li>
101 <li>
102 <ul class="inheritance">
103 <li>java.lang.Enum&lt;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a>&gt;</li>
104 <li>
105 <ul class="inheritance">
106 <li>compbio.data.sequence.GlobProtResult</li>
107 </ul>
108 </li>
109 </ul>
110 </li>
111 </ul>
112 <div class="description">
113 <ul class="blockList">
114 <li class="blockList">
115 <dl>
116 <dt>All Implemented Interfaces:</dt>
117 <dd>java.io.Serializable, java.lang.Comparable&lt;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a>&gt;</dd>
118 </dl>
119 <hr>
120 <br>
121 <pre> enum <span class="typeNameLabel">GlobProtResult</span>
122 extends java.lang.Enum&lt;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a>&gt;</pre>
123 </li>
124 </ul>
125 </div>
126 <div class="summary">
127 <ul class="blockList">
128 <li class="blockList">
129 <!-- =========== ENUM CONSTANT SUMMARY =========== -->
130 <ul class="blockList">
131 <li class="blockList"><a name="enum.constant.summary">
132 <!--   -->
133 </a>
134 <h3>Enum Constant Summary</h3>
135 <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Enum Constant Summary table, listing enum constants, and an explanation">
136 <caption><span>Enum Constants</span><span class="tabEnd">&nbsp;</span></caption>
137 <tr>
138 <th class="colOne" scope="col">Enum Constant and Description</th>
139 </tr>
140 <tr class="altColor">
141 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#Disorder">Disorder</a></span></code>
142 <div class="block">This a range with no scores</div>
143 </td>
144 </tr>
145 <tr class="rowColor">
146 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#Dydx">Dydx</a></span></code>
147 <div class="block">This a score with no range</div>
148 </td>
149 </tr>
150 <tr class="altColor">
151 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#GlobDoms">GlobDoms</a></span></code>
152 <div class="block">This a range with no scores</div>
153 </td>
154 </tr>
155 <tr class="rowColor">
156 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#RawScore">RawScore</a></span></code>
157 <div class="block">This a score with no range</div>
158 </td>
159 </tr>
160 <tr class="altColor">
161 <td class="colOne"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#SmoothedScore">SmoothedScore</a></span></code>
162 <div class="block">This a score with no range</div>
163 </td>
164 </tr>
165 </table>
166 </li>
167 </ul>
168 <!-- ========== METHOD SUMMARY =========== -->
169 <ul class="blockList">
170 <li class="blockList"><a name="method.summary">
171 <!--   -->
172 </a>
173 <h3>Method Summary</h3>
174 <table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation">
175 <caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd">&nbsp;</span></span><span id="t1" class="tableTab"><span><a href="javascript:show(1);">Static Methods</a></span><span class="tabEnd">&nbsp;</span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd">&nbsp;</span></span></caption>
176 <tr>
177 <th class="colFirst" scope="col">Modifier and Type</th>
178 <th class="colLast" scope="col">Method and Description</th>
179 </tr>
180 <tr id="i0" class="altColor">
181 <td class="colFirst"><code>static <a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a></code></td>
182 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#valueOf-java.lang.String-">valueOf</a></span>(java.lang.String&nbsp;name)</code>
183 <div class="block">Returns the enum constant of this type with the specified name.</div>
184 </td>
185 </tr>
186 <tr id="i1" class="rowColor">
187 <td class="colFirst"><code>static <a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a>[]</code></td>
188 <td class="colLast"><code><span class="memberNameLink"><a href="../../../compbio/data/sequence/GlobProtResult.html#values--">values</a></span>()</code>
189 <div class="block">Returns an array containing the constants of this enum type, in
190 the order they are declared.</div>
191 </td>
192 </tr>
193 </table>
194 <ul class="blockList">
195 <li class="blockList"><a name="methods.inherited.from.class.java.lang.Enum">
196 <!--   -->
197 </a>
198 <h3>Methods inherited from class&nbsp;java.lang.Enum</h3>
199 <code>clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf</code></li>
200 </ul>
201 <ul class="blockList">
202 <li class="blockList"><a name="methods.inherited.from.class.java.lang.Object">
203 <!--   -->
204 </a>
205 <h3>Methods inherited from class&nbsp;java.lang.Object</h3>
206 <code>getClass, notify, notifyAll, wait, wait, wait</code></li>
207 </ul>
208 </li>
209 </ul>
210 </li>
211 </ul>
212 </div>
213 <div class="details">
214 <ul class="blockList">
215 <li class="blockList">
216 <!-- ============ ENUM CONSTANT DETAIL =========== -->
217 <ul class="blockList">
218 <li class="blockList"><a name="enum.constant.detail">
219 <!--   -->
220 </a>
221 <h3>Enum Constant Detail</h3>
222 <a name="GlobDoms">
223 <!--   -->
224 </a>
225 <ul class="blockList">
226 <li class="blockList">
227 <h4>GlobDoms</h4>
228 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a> GlobDoms</pre>
229 <div class="block">This a range with no scores</div>
230 </li>
231 </ul>
232 <a name="Disorder">
233 <!--   -->
234 </a>
235 <ul class="blockList">
236 <li class="blockList">
237 <h4>Disorder</h4>
238 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a> Disorder</pre>
239 <div class="block">This a range with no scores</div>
240 </li>
241 </ul>
242 <a name="Dydx">
243 <!--   -->
244 </a>
245 <ul class="blockList">
246 <li class="blockList">
247 <h4>Dydx</h4>
248 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a> Dydx</pre>
249 <div class="block">This a score with no range</div>
250 </li>
251 </ul>
252 <a name="SmoothedScore">
253 <!--   -->
254 </a>
255 <ul class="blockList">
256 <li class="blockList">
257 <h4>SmoothedScore</h4>
258 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a> SmoothedScore</pre>
259 <div class="block">This a score with no range</div>
260 </li>
261 </ul>
262 <a name="RawScore">
263 <!--   -->
264 </a>
265 <ul class="blockListLast">
266 <li class="blockList">
267 <h4>RawScore</h4>
268 <pre>public static final&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a> RawScore</pre>
269 <div class="block">This a score with no range</div>
270 </li>
271 </ul>
272 </li>
273 </ul>
274 <!-- ============ METHOD DETAIL ========== -->
275 <ul class="blockList">
276 <li class="blockList"><a name="method.detail">
277 <!--   -->
278 </a>
279 <h3>Method Detail</h3>
280 <a name="values--">
281 <!--   -->
282 </a>
283 <ul class="blockList">
284 <li class="blockList">
285 <h4>values</h4>
286 <pre>public static&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a>[]&nbsp;values()</pre>
287 <div class="block">Returns an array containing the constants of this enum type, in
288 the order they are declared.  This method may be used to iterate
289 over the constants as follows:
290 <pre>
291 for (GlobProtResult c : GlobProtResult.values())
292 &nbsp;   System.out.println(c);
293 </pre></div>
294 <dl>
295 <dt><span class="returnLabel">Returns:</span></dt>
296 <dd>an array containing the constants of this enum type, in the order they are declared</dd>
297 </dl>
298 </li>
299 </ul>
300 <a name="valueOf-java.lang.String-">
301 <!--   -->
302 </a>
303 <ul class="blockListLast">
304 <li class="blockList">
305 <h4>valueOf</h4>
306 <pre>public static&nbsp;<a href="../../../compbio/data/sequence/GlobProtResult.html" title="enum in compbio.data.sequence">GlobProtResult</a>&nbsp;valueOf(java.lang.String&nbsp;name)</pre>
307 <div class="block">Returns the enum constant of this type with the specified name.
308 The string must match <i>exactly</i> an identifier used to declare an
309 enum constant in this type.  (Extraneous whitespace characters are 
310 not permitted.)</div>
311 <dl>
312 <dt><span class="paramLabel">Parameters:</span></dt>
313 <dd><code>name</code> - the name of the enum constant to be returned.</dd>
314 <dt><span class="returnLabel">Returns:</span></dt>
315 <dd>the enum constant with the specified name</dd>
316 <dt><span class="throwsLabel">Throws:</span></dt>
317 <dd><code>java.lang.IllegalArgumentException</code> - if this enum type has no constant with the specified name</dd>
318 <dd><code>java.lang.NullPointerException</code> - if the argument is null</dd>
319 </dl>
320 </li>
321 </ul>
322 </li>
323 </ul>
324 </li>
325 </ul>
326 </div>
327 </div>
328 <!-- ========= END OF CLASS DATA ========= -->
329 <!-- ======= START OF BOTTOM NAVBAR ====== -->
330 <div class="bottomNav"><a name="navbar.bottom">
331 <!--   -->
332 </a>
333 <div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
334 <a name="navbar.bottom.firstrow">
335 <!--   -->
336 </a>
337 <ul class="navList" title="Navigation">
338 <li><a href="../../../overview-summary.html">Overview</a></li>
339 <li><a href="package-summary.html">Package</a></li>
340 <li class="navBarCell1Rev">Class</li>
341 <li><a href="class-use/GlobProtResult.html">Use</a></li>
342 <li><a href="package-tree.html">Tree</a></li>
343 <li><a href="../../../deprecated-list.html">Deprecated</a></li>
344 <li><a href="../../../index-files/index-1.html">Index</a></li>
345 <li><a href="../../../help-doc.html">Help</a></li>
346 </ul>
347 </div>
348 <div class="subNav">
349 <ul class="navList">
350 <li><a href="../../../compbio/data/sequence/FastaSequence.html" title="class in compbio.data.sequence"><span class="typeNameLink">Prev&nbsp;Class</span></a></li>
351 <li><a href="../../../compbio/data/sequence/IUPredResult.html" title="enum in compbio.data.sequence"><span class="typeNameLink">Next&nbsp;Class</span></a></li>
352 </ul>
353 <ul class="navList">
354 <li><a href="../../../index.html?compbio/data/sequence/GlobProtResult.html" target="_top">Frames</a></li>
355 <li><a href="GlobProtResult.html" target="_top">No&nbsp;Frames</a></li>
356 </ul>
357 <ul class="navList" id="allclasses_navbar_bottom">
358 <li><a href="../../../allclasses-noframe.html">All&nbsp;Classes</a></li>
359 </ul>
360 <div>
361 <script type="text/javascript"><!--
362   allClassesLink = document.getElementById("allclasses_navbar_bottom");
363   if(window==top) {
364     allClassesLink.style.display = "block";
365   }
366   else {
367     allClassesLink.style.display = "none";
368   }
369   //-->
370 </script>
371 </div>
372 <div>
373 <ul class="subNavList">
374 <li>Summary:&nbsp;</li>
375 <li>Nested&nbsp;|&nbsp;</li>
376 <li><a href="#enum.constant.summary">Enum Constants</a>&nbsp;|&nbsp;</li>
377 <li>Field&nbsp;|&nbsp;</li>
378 <li><a href="#method.summary">Method</a></li>
379 </ul>
380 <ul class="subNavList">
381 <li>Detail:&nbsp;</li>
382 <li><a href="#enum.constant.detail">Enum Constants</a>&nbsp;|&nbsp;</li>
383 <li>Field&nbsp;|&nbsp;</li>
384 <li><a href="#method.detail">Method</a></li>
385 </ul>
386 </div>
387 <a name="skip.navbar.bottom">
388 <!--   -->
389 </a></div>
390 <!-- ======== END OF BOTTOM NAVBAR ======= -->
391 </body>
392 </html>