website/docs/full_javadoc/compbio/data/sequence/package-frame.html

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   6 <title>compbio.data.sequence</title>
   7 <meta name="date" content="2017-04-21">
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  11 <body>
  12 <h1 class="bar"><a href="../../../compbio/data/sequence/package-summary.html" target="classFrame">compbio.data.sequence</a></h1>
  13 <div class="indexContainer">
  14 <h2 title="Classes">Classes</h2>
  15 <ul title="Classes">
  16 <li><a href="Alignment.html" title="class in compbio.data.sequence" target="classFrame">Alignment</a></li>
  17 <li><a href="AlignmentMetadata.html" title="class in compbio.data.sequence" target="classFrame">AlignmentMetadata</a></li>
  18 <li><a href="ClustalAlignmentUtil.html" title="class in compbio.data.sequence" target="classFrame">ClustalAlignmentUtil</a></li>
  19 <li><a href="FastaReader.html" title="class in compbio.data.sequence" target="classFrame">FastaReader</a></li>
  20 <li><a href="FastaSequence.html" title="class in compbio.data.sequence" target="classFrame">FastaSequence</a></li>
  21 <li><a href="Range.html" title="class in compbio.data.sequence" target="classFrame">Range</a></li>
  22 <li><a href="RNAStructReader.html" title="class in compbio.data.sequence" target="classFrame">RNAStructReader</a></li>
  23 <li><a href="RNAStructScoreManager.html" title="class in compbio.data.sequence" target="classFrame">RNAStructScoreManager</a></li>
  24 <li><a href="Score.html" title="class in compbio.data.sequence" target="classFrame">Score</a></li>
  25 <li><a href="ScoreManager.html" title="class in compbio.data.sequence" target="classFrame">ScoreManager</a></li>
  26 <li><a href="ScoreManager.ScoreHolder.html" title="class in compbio.data.sequence" target="classFrame">ScoreManager.ScoreHolder</a></li>
  27 <li><a href="SequenceUtil.html" title="class in compbio.data.sequence" target="classFrame">SequenceUtil</a></li>
  28 </ul>
  29 <h2 title="Enums">Enums</h2>
  30 <ul title="Enums">
  31 <li><a href="ConservationMethod.html" title="enum in compbio.data.sequence" target="classFrame">ConservationMethod</a></li>
  32 <li><a href="DisemblResult.html" title="enum in compbio.data.sequence" target="classFrame">DisemblResult</a></li>
  33 <li><a href="DisorderMethod.html" title="enum in compbio.data.sequence" target="classFrame">DisorderMethod</a></li>
  34 <li><a href="GlobProtResult.html" title="enum in compbio.data.sequence" target="classFrame">GlobProtResult</a></li>
  35 <li><a href="IUPredResult.html" title="enum in compbio.data.sequence" target="classFrame">IUPredResult</a></li>
  36 <li><a href="Program.html" title="enum in compbio.data.sequence" target="classFrame">Program</a></li>
  37 <li><a href="RNAStructReader.AlifoldLine.html" title="enum in compbio.data.sequence" target="classFrame">RNAStructReader.AlifoldLine</a></li>
  38 <li><a href="RNAStructReader.AlifoldResult.html" title="enum in compbio.data.sequence" target="classFrame">RNAStructReader.AlifoldResult</a></li>
  39 <li><a href="RNAStructReader.RNAOut.html" title="enum in compbio.data.sequence" target="classFrame">RNAStructReader.RNAOut</a></li>
  40 <li><a href="SMERFSConstraints.html" title="enum in compbio.data.sequence" target="classFrame">SMERFSConstraints</a></li>
  41 </ul>
  42 <h2 title="Exceptions">Exceptions</h2>
  43 <ul title="Exceptions">
  44 <li><a href="UnknownFileFormatException.html" title="class in compbio.data.sequence" target="classFrame">UnknownFileFormatException</a></li>
  45 </ul>
  46 </div>
  47 </body>
  48 </html>