website/docs/full_javadoc/index-files/index-5.html

   1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
   2 <!-- NewPage -->
   3 <html lang="en">
   4 <head>
   5 <!-- Generated by javadoc (1.8.0_121) on Fri Apr 21 15:32:51 BST 2017 -->
   6 <title>E-Index</title>
   7 <meta name="date" content="2017-04-21">
   8 <link rel="stylesheet" type="text/css" href="../stylesheet.css" title="Style">
   9 <script type="text/javascript" src="../script.js"></script>
  10 </head>
  11 <body>
  12 <script type="text/javascript"><!--
  13     try {
  14         if (location.href.indexOf('is-external=true') == -1) {
  15             parent.document.title="E-Index";
  16         }
  17     }
  18     catch(err) {
  19     }
  20 //-->
  21 </script>
  22 <noscript>
  23 <div>JavaScript is disabled on your browser.</div>
  24 </noscript>
  25 <!-- ========= START OF TOP NAVBAR ======= -->
  26 <div class="topNav"><a name="navbar.top">
  27 <!--   -->
  28 </a>
  29 <div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div>
  30 <a name="navbar.top.firstrow">
  31 <!--   -->
  32 </a>
  33 <ul class="navList" title="Navigation">
  34 <li><a href="../overview-summary.html">Overview</a></li>
  35 <li>Package</li>
  36 <li>Class</li>
  37 <li>Use</li>
  38 <li><a href="../overview-tree.html">Tree</a></li>
  39 <li><a href="../deprecated-list.html">Deprecated</a></li>
  40 <li class="navBarCell1Rev">Index</li>
  41 <li><a href="../help-doc.html">Help</a></li>
  42 </ul>
  43 </div>
  44 <div class="subNav">
  45 <ul class="navList">
  46 <li><a href="index-4.html">Prev Letter</a></li>
  47 <li><a href="index-6.html">Next Letter</a></li>
  48 </ul>
  49 <ul class="navList">
  50 <li><a href="../index.html?index-files/index-5.html" target="_top">Frames</a></li>
  51 <li><a href="index-5.html" target="_top">No&nbsp;Frames</a></li>
  52 </ul>
  53 <ul class="navList" id="allclasses_navbar_top">
  54 <li><a href="../allclasses-noframe.html">All&nbsp;Classes</a></li>
  55 </ul>
  56 <div>
  57 <script type="text/javascript"><!--
  58   allClassesLink = document.getElementById("allclasses_navbar_top");
  59   if(window==top) {
  60     allClassesLink.style.display = "block";
  61   }
  62   else {
  63     allClassesLink.style.display = "none";
  64   }
  65   //-->
  66 </script>
  67 </div>
  68 <a name="skip.navbar.top">
  69 <!--   -->
  70 </a></div>
  71 <!-- ========= END OF TOP NAVBAR ========= -->
  72 <div class="contentContainer"><a href="index-1.html">A</a>&nbsp;<a href="index-2.html">B</a>&nbsp;<a href="index-3.html">C</a>&nbsp;<a href="index-4.html">D</a>&nbsp;<a href="index-5.html">E</a>&nbsp;<a href="index-6.html">F</a>&nbsp;<a href="index-7.html">G</a>&nbsp;<a href="index-8.html">H</a>&nbsp;<a href="index-9.html">I</a>&nbsp;<a href="index-10.html">J</a>&nbsp;<a href="index-11.html">K</a>&nbsp;<a href="index-12.html">L</a>&nbsp;<a href="index-13.html">M</a>&nbsp;<a href="index-14.html">N</a>&nbsp;<a href="index-15.html">O</a>&nbsp;<a href="index-16.html">P</a>&nbsp;<a href="index-17.html">Q</a>&nbsp;<a href="index-18.html">R</a>&nbsp;<a href="index-19.html">S</a>&nbsp;<a href="index-20.html">T</a>&nbsp;<a href="index-21.html">U</a>&nbsp;<a href="index-22.html">V</a>&nbsp;<a href="index-23.html">W</a>&nbsp;<a href="index-24.html">_</a>&nbsp;<a name="I:E">
  73 <!--   -->
  74 </a>
  75 <h2 class="title">E</h2>
  76 <dl>
  77 <dt><span class="memberNameLink"><a href="../compbio/engine/cluster/drmaa/StatisticManager.html#end_time">end_time</a></span> - Variable in class compbio.engine.cluster.drmaa.<a href="../compbio/engine/cluster/drmaa/StatisticManager.html" title="class in compbio.engine.cluster.drmaa">StatisticManager</a></dt>
  78 <dd>&nbsp;</dd>
  79 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.html#energyP">energyP</a></span> - Static variable in class compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.html" title="class in compbio.data.sequence">RNAStructReader</a></dt>
  80 <dd>&nbsp;</dd>
  81 <dt><a href="../compbio/engine/client/EngineUtil.html" title="class in compbio.engine.client"><span class="typeNameLink">EngineUtil</span></a> - Class in <a href="../compbio/engine/client/package-summary.html">compbio.engine.client</a></dt>
  82 <dd>&nbsp;</dd>
  83 <dt><span class="memberNameLink"><a href="../compbio/engine/client/EngineUtil.html#EngineUtil--">EngineUtil()</a></span> - Constructor for class compbio.engine.client.<a href="../compbio/engine/client/EngineUtil.html" title="class in compbio.engine.client">EngineUtil</a></dt>
  84 <dd>&nbsp;</dd>
  85 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructReader.html#ensembleFreqP">ensembleFreqP</a></span> - Static variable in class compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructReader.html" title="class in compbio.data.sequence">RNAStructReader</a></dt>
  86 <dd>&nbsp;</dd>
  87 <dt><a href="../compbio/engine/client/EnvVariableProcessor.html" title="class in compbio.engine.client"><span class="typeNameLink">EnvVariableProcessor</span></a> - Class in <a href="../compbio/engine/client/package-summary.html">compbio.engine.client</a></dt>
  88 <dd>&nbsp;</dd>
  89 <dt><span class="memberNameLink"><a href="../compbio/engine/client/EnvVariableProcessor.html#EnvVariableProcessor--">EnvVariableProcessor()</a></span> - Constructor for class compbio.engine.client.<a href="../compbio/engine/client/EnvVariableProcessor.html" title="class in compbio.engine.client">EnvVariableProcessor</a></dt>
  90 <dd>&nbsp;</dd>
  91 <dt><span class="memberNameLink"><a href="../compbio/data/msa/Category.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.msa.<a href="../compbio/data/msa/Category.html" title="class in compbio.data.msa">Category</a></dt>
  92 <dd>&nbsp;</dd>
  93 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/Alignment.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/Alignment.html" title="class in compbio.data.sequence">Alignment</a></dt>
  94 <dd>
  95 <div class="block">Please note that this implementation does not take the order of sequences
  96  into account!</div>
  97 </dd>
  98 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/AlignmentMetadata.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/AlignmentMetadata.html" title="class in compbio.data.sequence">AlignmentMetadata</a></dt>
  99 <dd>&nbsp;</dd>
 100 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/FastaSequence.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/FastaSequence.html" title="class in compbio.data.sequence">FastaSequence</a></dt>
 101 <dd>&nbsp;</dd>
 102 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/Range.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/Range.html" title="class in compbio.data.sequence">Range</a></dt>
 103 <dd>&nbsp;</dd>
 104 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/RNAStructScoreManager.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/RNAStructScoreManager.html" title="class in compbio.data.sequence">RNAStructScoreManager</a></dt>
 105 <dd>&nbsp;</dd>
 106 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/Score.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/Score.html" title="class in compbio.data.sequence">Score</a></dt>
 107 <dd>&nbsp;</dd>
 108 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/ScoreManager.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/ScoreManager.html" title="class in compbio.data.sequence">ScoreManager</a></dt>
 109 <dd>&nbsp;</dd>
 110 <dt><span class="memberNameLink"><a href="../compbio/data/sequence/ScoreManager.ScoreHolder.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.data.sequence.<a href="../compbio/data/sequence/ScoreManager.ScoreHolder.html" title="class in compbio.data.sequence">ScoreManager.ScoreHolder</a></dt>
 111 <dd>&nbsp;</dd>
 112 <dt><span class="memberNameLink"><a href="../compbio/engine/client/CommandBuilder.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.client.<a href="../compbio/engine/client/CommandBuilder.html" title="class in compbio.engine.client">CommandBuilder</a></dt>
 113 <dd>&nbsp;</dd>
 114 <dt><span class="memberNameLink"><a href="../compbio/engine/client/CommandBuilder.Parameter.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.client.<a href="../compbio/engine/client/CommandBuilder.Parameter.html" title="class in compbio.engine.client">CommandBuilder.Parameter</a></dt>
 115 <dd>&nbsp;</dd>
 116 <dt><span class="memberNameLink"><a href="../compbio/engine/client/RunConfiguration.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.client.<a href="../compbio/engine/client/RunConfiguration.html" title="class in compbio.engine.client">RunConfiguration</a></dt>
 117 <dd>&nbsp;</dd>
 118 <dt><span class="memberNameLink"><a href="../compbio/engine/client/SkeletalExecutable.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.client.<a href="../compbio/engine/client/SkeletalExecutable.html" title="class in compbio.engine.client">SkeletalExecutable</a></dt>
 119 <dd>&nbsp;</dd>
 120 <dt><span class="memberNameLink"><a href="../compbio/engine/ClusterJobId.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.<a href="../compbio/engine/ClusterJobId.html" title="class in compbio.engine">ClusterJobId</a></dt>
 121 <dd>&nbsp;</dd>
 122 <dt><span class="memberNameLink"><a href="../compbio/engine/FilePuller.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.<a href="../compbio/engine/FilePuller.html" title="class in compbio.engine">FilePuller</a></dt>
 123 <dd>&nbsp;</dd>
 124 <dt><span class="memberNameLink"><a href="../compbio/engine/Job.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.engine.<a href="../compbio/engine/Job.html" title="class in compbio.engine">Job</a></dt>
 125 <dd>&nbsp;</dd>
 126 <dt><span class="memberNameLink"><a href="../compbio/metadata/ChunkHolder.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/ChunkHolder.html" title="class in compbio.metadata">ChunkHolder</a></dt>
 127 <dd>&nbsp;</dd>
 128 <dt><span class="memberNameLink"><a href="../compbio/metadata/Limit.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Limit.html" title="class in compbio.metadata">Limit</a></dt>
 129 <dd>&nbsp;</dd>
 130 <dt><span class="memberNameLink"><a href="../compbio/metadata/Option.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Option.html" title="class in compbio.metadata">Option</a></dt>
 131 <dd>&nbsp;</dd>
 132 <dt><span class="memberNameLink"><a href="../compbio/metadata/Parameter.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Parameter.html" title="class in compbio.metadata">Parameter</a></dt>
 133 <dd>&nbsp;</dd>
 134 <dt><span class="memberNameLink"><a href="../compbio/metadata/Preset.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/Preset.html" title="class in compbio.metadata">Preset</a></dt>
 135 <dd>&nbsp;</dd>
 136 <dt><span class="memberNameLink"><a href="../compbio/metadata/RunnerConfig.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/RunnerConfig.html" title="class in compbio.metadata">RunnerConfig</a></dt>
 137 <dd>&nbsp;</dd>
 138 <dt><span class="memberNameLink"><a href="../compbio/metadata/ValueConstrain.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.metadata.<a href="../compbio/metadata/ValueConstrain.html" title="class in compbio.metadata">ValueConstrain</a></dt>
 139 <dd>&nbsp;</dd>
 140 <dt><span class="memberNameLink"><a href="../compbio/stat/collector/JobDirectory.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.stat.collector.<a href="../compbio/stat/collector/JobDirectory.html" title="class in compbio.stat.collector">JobDirectory</a></dt>
 141 <dd>&nbsp;</dd>
 142 <dt><span class="memberNameLink"><a href="../compbio/stat/collector/JobStat.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.stat.collector.<a href="../compbio/stat/collector/JobStat.html" title="class in compbio.stat.collector">JobStat</a></dt>
 143 <dd>&nbsp;</dd>
 144 <dt><span class="memberNameLink"><a href="../compbio/stat/servlet/ServiceTestResult.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.stat.servlet.<a href="../compbio/stat/servlet/ServiceTestResult.html" title="class in compbio.stat.servlet">ServiceTestResult</a></dt>
 145 <dd>&nbsp;</dd>
 146 <dt><span class="memberNameLink"><a href="../compbio/stat/servlet/util/StatCollection.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class compbio.stat.servlet.util.<a href="../compbio/stat/servlet/util/StatCollection.html" title="class in compbio.stat.servlet.util">StatCollection</a></dt>
 147 <dd>&nbsp;</dd>
 148 <dt><span class="memberNameLink"><a href="../compbio/engine/client/RunConfiguration.html#error">error</a></span> - Variable in class compbio.engine.client.<a href="../compbio/engine/client/RunConfiguration.html" title="class in compbio.engine.client">RunConfiguration</a></dt>
 149 <dd>
 150 <div class="block">Input option</div>
 151 </dd>
 152 <dt><span class="memberNameLink"><a href="../compbio/engine/client/SkeletalExecutable.html#ERROR">ERROR</a></span> - Static variable in class compbio.engine.client.<a href="../compbio/engine/client/SkeletalExecutable.html" title="class in compbio.engine.client">SkeletalExecutable</a></dt>
 153 <dd>&nbsp;</dd>
 154 <dt><span class="memberNameLink"><a href="../compbio/engine/client/SkeletalExecutable.html#errorFile">errorFile</a></span> - Variable in class compbio.engine.client.<a href="../compbio/engine/client/SkeletalExecutable.html" title="class in compbio.engine.client">SkeletalExecutable</a></dt>
 155 <dd>&nbsp;</dd>
 156 <dt><span class="memberNameLink"><a href="../compbio/engine/local/ExecutableWrapper.html#es">es</a></span> - Static variable in class compbio.engine.local.<a href="../compbio/engine/local/ExecutableWrapper.html" title="class in compbio.engine.local">ExecutableWrapper</a></dt>
 157 <dd>&nbsp;</dd>
 158 <dt><span class="memberNameLink"><a href="../compbio/engine/client/ConfExecutable.html#exec">exec</a></span> - Variable in class compbio.engine.client.<a href="../compbio/engine/client/ConfExecutable.html" title="class in compbio.engine.client">ConfExecutable</a></dt>
 159 <dd>&nbsp;</dd>
 160 <dt><span class="memberNameLink"><a href="../compbio/ws/server/GenericMetadataService.html#exec">exec</a></span> - Variable in class compbio.ws.server.<a href="../compbio/ws/server/GenericMetadataService.html" title="class in compbio.ws.server">GenericMetadataService</a></dt>
 161 <dd>&nbsp;</dd>
 162 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/ClustalO.html#EXEC_STAT_FILE">EXEC_STAT_FILE</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/ClustalO.html" title="class in compbio.runner.msa">ClustalO</a></dt>
 163 <dd>&nbsp;</dd>
 164 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/ClustalW.html#EXEC_STAT_FILE">EXEC_STAT_FILE</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/ClustalW.html" title="class in compbio.runner.msa">ClustalW</a></dt>
 165 <dd>&nbsp;</dd>
 166 <dt><span class="memberNameLink"><a href="../compbio/runner/msa/Muscle.html#EXEC_STAT_FILE">EXEC_STAT_FILE</a></span> - Static variable in class compbio.runner.msa.<a href="../compbio/runner/msa/Muscle.html" title="class in compbio.runner.msa">Muscle</a></dt>
 167 <dd>&nbsp;</dd>
 168 <dt><span class="memberNameLink"><a href="../compbio/engine/client/Executable.ExecProvider.html#ExecProvider--">ExecProvider()</a></span> - Constructor for enum compbio.engine.client.<a href="../compbio/engine/client/Executable.ExecProvider.html" title="enum in compbio.engine.client">Executable.ExecProvider</a></dt>
 169 <dd>&nbsp;</dd>
 170 <dt><a href="../compbio/engine/client/Executable.html" title="interface in compbio.engine.client"><span class="typeNameLink">Executable</span></a>&lt;<a href="../compbio/engine/client/Executable.html" title="type parameter in Executable">T</a>&gt; - Interface in <a href="../compbio/engine/client/package-summary.html">compbio.engine.client</a></dt>
 171 <dd>
 172 <div class="block">Interface to a native executable.</div>
 173 </dd>
 174 <dt><span class="memberNameLink"><a href="../compbio/engine/local/LocalRunner.html#executable">executable</a></span> - Variable in class compbio.engine.local.<a href="../compbio/engine/local/LocalRunner.html" title="class in compbio.engine.local">LocalRunner</a></dt>
 175 <dd>&nbsp;</dd>
 176 <dt><a href="../compbio/engine/client/Executable.ExecProvider.html" title="enum in compbio.engine.client"><span class="typeNameLink">Executable.ExecProvider</span></a> - Enum in <a href="../compbio/engine/client/package-summary.html">compbio.engine.client</a></dt>
 177 <dd>&nbsp;</dd>
 178 <dt><a href="../compbio/engine/local/ExecutableWrapper.html" title="class in compbio.engine.local"><span class="typeNameLink">ExecutableWrapper</span></a> - Class in <a href="../compbio/engine/local/package-summary.html">compbio.engine.local</a></dt>
 179 <dd>&nbsp;</dd>
 180 <dt><span class="memberNameLink"><a href="../compbio/engine/local/ExecutableWrapper.html#ExecutableWrapper-compbio.engine.client.ConfiguredExecutable-java.lang.String-">ExecutableWrapper(ConfiguredExecutable&lt;?&gt;, String)</a></span> - Constructor for class compbio.engine.local.<a href="../compbio/engine/local/ExecutableWrapper.html" title="class in compbio.engine.local">ExecutableWrapper</a></dt>
 181 <dd>&nbsp;</dd>
 182 <dt><span class="memberNameLink"><a href="../compbio/engine/cluster/drmaa/ClusterRunner.html#executeJob--">executeJob()</a></span> - Method in class compbio.engine.cluster.drmaa.<a href="../compbio/engine/cluster/drmaa/ClusterRunner.html" title="class in compbio.engine.cluster.drmaa">ClusterRunner</a></dt>
 183 <dd>&nbsp;</dd>
 184 <dt><span class="memberNameLink"><a href="../compbio/engine/cluster/drmaa/JobRunner.html#executeJob--">executeJob()</a></span> - Method in class compbio.engine.cluster.drmaa.<a href="../compbio/engine/cluster/drmaa/JobRunner.html" title="class in compbio.engine.cluster.drmaa">JobRunner</a></dt>
 185 <dd>&nbsp;</dd>
 186 <dt><span class="memberNameLink"><a href="../compbio/engine/local/LocalRunner.html#executeJob--">executeJob()</a></span> - Method in class compbio.engine.local.<a href="../compbio/engine/local/LocalRunner.html" title="class in compbio.engine.local">LocalRunner</a></dt>
 187 <dd>&nbsp;</dd>
 188 <dt><span class="memberNameLink"><a href="../compbio/engine/SyncExecutor.html#executeJob--">executeJob()</a></span> - Method in interface compbio.engine.<a href="../compbio/engine/SyncExecutor.html" title="interface in compbio.engine">SyncExecutor</a></dt>
 189 <dd>
 190 <div class="block">Execute the job</div>
 191 </dd>
 192 <dt><a href="../compbio/stat/collector/ExecutionStatCollector.html" title="class in compbio.stat.collector"><span class="typeNameLink">ExecutionStatCollector</span></a> - Class in <a href="../compbio/stat/collector/package-summary.html">compbio.stat.collector</a></dt>
 193 <dd>
 194 <div class="block">Class assumptions:
 195  1.</div>
 196 </dd>
 197 <dt><span class="memberNameLink"><a href="../compbio/stat/collector/ExecutionStatCollector.html#ExecutionStatCollector-java.lang.String-int-">ExecutionStatCollector(String, int)</a></span> - Constructor for class compbio.stat.collector.<a href="../compbio/stat/collector/ExecutionStatCollector.html" title="class in compbio.stat.collector">ExecutionStatCollector</a></dt>
 198 <dd>
 199 <div class="block">List subdirectories in the job directory</div>
 200 </dd>
 201 <dt><span class="memberNameLink"><a href="../compbio/engine/local/LocalRunner.html#executor">executor</a></span> - Variable in class compbio.engine.local.<a href="../compbio/engine/local/LocalRunner.html" title="class in compbio.engine.local">LocalRunner</a></dt>
 202 <dd>&nbsp;</dd>
 203 <dt><span class="memberNameLink"><a href="../compbio/stat/servlet/StatisticCollector.html#executor">executor</a></span> - Variable in class compbio.stat.servlet.<a href="../compbio/stat/servlet/StatisticCollector.html" title="class in compbio.stat.servlet">StatisticCollector</a></dt>
 204 <dd>&nbsp;</dd>
 205 <dt><span class="memberNameLink"><a href="../compbio/ws/server/MainManager.html#executor">executor</a></span> - Variable in class compbio.ws.server.<a href="../compbio/ws/server/MainManager.html" title="class in compbio.ws.server">MainManager</a></dt>
 206 <dd>&nbsp;</dd>
 207 <dt><span class="memberNameLink"><a href="../compbio/engine/cluster/drmaa/StatisticManager.html#exit_status">exit_status</a></span> - Variable in class compbio.engine.cluster.drmaa.<a href="../compbio/engine/cluster/drmaa/StatisticManager.html" title="class in compbio.engine.cluster.drmaa">StatisticManager</a></dt>
 208 <dd>&nbsp;</dd>
 209 </dl>
 210 <a href="index-1.html">A</a>&nbsp;<a href="index-2.html">B</a>&nbsp;<a href="index-3.html">C</a>&nbsp;<a href="index-4.html">D</a>&nbsp;<a href="index-5.html">E</a>&nbsp;<a href="index-6.html">F</a>&nbsp;<a href="index-7.html">G</a>&nbsp;<a href="index-8.html">H</a>&nbsp;<a href="index-9.html">I</a>&nbsp;<a href="index-10.html">J</a>&nbsp;<a href="index-11.html">K</a>&nbsp;<a href="index-12.html">L</a>&nbsp;<a href="index-13.html">M</a>&nbsp;<a href="index-14.html">N</a>&nbsp;<a href="index-15.html">O</a>&nbsp;<a href="index-16.html">P</a>&nbsp;<a href="index-17.html">Q</a>&nbsp;<a href="index-18.html">R</a>&nbsp;<a href="index-19.html">S</a>&nbsp;<a href="index-20.html">T</a>&nbsp;<a href="index-21.html">U</a>&nbsp;<a href="index-22.html">V</a>&nbsp;<a href="index-23.html">W</a>&nbsp;<a href="index-24.html">_</a>&nbsp;</div>
 211 <!-- ======= START OF BOTTOM NAVBAR ====== -->
 212 <div class="bottomNav"><a name="navbar.bottom">
 213 <!--   -->
 214 </a>
 215 <div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div>
 216 <a name="navbar.bottom.firstrow">
 217 <!--   -->
 218 </a>
 219 <ul class="navList" title="Navigation">
 220 <li><a href="../overview-summary.html">Overview</a></li>
 221 <li>Package</li>
 222 <li>Class</li>
 223 <li>Use</li>
 224 <li><a href="../overview-tree.html">Tree</a></li>
 225 <li><a href="../deprecated-list.html">Deprecated</a></li>
 226 <li class="navBarCell1Rev">Index</li>
 227 <li><a href="../help-doc.html">Help</a></li>
 228 </ul>
 229 </div>
 230 <div class="subNav">
 231 <ul class="navList">
 232 <li><a href="index-4.html">Prev Letter</a></li>
 233 <li><a href="index-6.html">Next Letter</a></li>
 234 </ul>
 235 <ul class="navList">
 236 <li><a href="../index.html?index-files/index-5.html" target="_top">Frames</a></li>
 237 <li><a href="index-5.html" target="_top">No&nbsp;Frames</a></li>
 238 </ul>
 239 <ul class="navList" id="allclasses_navbar_bottom">
 240 <li><a href="../allclasses-noframe.html">All&nbsp;Classes</a></li>
 241 </ul>
 242 <div>
 243 <script type="text/javascript"><!--
 244   allClassesLink = document.getElementById("allclasses_navbar_bottom");
 245   if(window==top) {
 246     allClassesLink.style.display = "block";
 247   }
 248   else {
 249     allClassesLink.style.display = "none";
 250   }
 251   //-->
 252 </script>
 253 </div>
 254 <a name="skip.navbar.bottom">
 255 <!--   -->
 256 </a></div>
 257 <!-- ======== END OF BOTTOM NAVBAR ======= -->
 258 </body>
 259 </html>