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7 Uses of Class compbio.metadata.JobStatus
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18 parent.document.title="Uses of Class compbio.metadata.JobStatus";
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84 <B>Uses of Class<br>compbio.metadata.JobStatus</B></H2>
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87 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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88 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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89 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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90 Packages that use <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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92 <TR BGCOLOR="white" CLASS="TableRowColor">
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93 <TD><A HREF="#compbio.data.msa"><B>compbio.data.msa</B></A></TD>
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94 <TD> </TD>
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96 <TR BGCOLOR="white" CLASS="TableRowColor">
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97 <TD><A HREF="#compbio.data.msa.jaxws"><B>compbio.data.msa.jaxws</B></A></TD>
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98 <TD> </TD>
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100 <TR BGCOLOR="white" CLASS="TableRowColor">
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101 <TD><A HREF="#compbio.engine"><B>compbio.engine</B></A></TD>
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102 <TD> </TD>
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104 <TR BGCOLOR="white" CLASS="TableRowColor">
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105 <TD><A HREF="#compbio.engine.client"><B>compbio.engine.client</B></A></TD>
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106 <TD>Classes and interfaces representing an input for engines. </TD>
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108 <TR BGCOLOR="white" CLASS="TableRowColor">
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109 <TD><A HREF="#compbio.engine.cluster.drmaa"><B>compbio.engine.cluster.drmaa</B></A></TD>
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110 <TD>An cluster engine classes responsible for execution of Executables on the clusters. </TD>
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112 <TR BGCOLOR="white" CLASS="TableRowColor">
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113 <TD><A HREF="#compbio.engine.local"><B>compbio.engine.local</B></A></TD>
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114 <TD>An local engine classes responsible for execution of Executables on the local computer
115 (the same machine as JVM running these classes). </TD>
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117 <TR BGCOLOR="white" CLASS="TableRowColor">
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118 <TD><A HREF="#compbio.metadata"><B>compbio.metadata</B></A></TD>
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119 <TD>A meta-data model for multiple sequence alignment web services
120 Classes in this package have no dependencies to other sources in the project. </TD>
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122 <TR BGCOLOR="white" CLASS="TableRowColor">
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123 <TD><A HREF="#compbio.ws.server"><B>compbio.ws.server</B></A></TD>
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124 <TD> </TD>
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129 <A NAME="compbio.data.msa"><!-- --></A>
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130 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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131 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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132 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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133 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/data/msa/package-summary.html">compbio.data.msa</A></FONT></TH>
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139 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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140 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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141 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/package-summary.html">compbio.data.msa</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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143 <TR BGCOLOR="white" CLASS="TableRowColor">
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144 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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145 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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146 <TD><CODE><B>MsaWS.</B><B><A HREF="../../../compbio/data/msa/MsaWS.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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149 Return the status of the job.</TD>
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154 <A NAME="compbio.data.msa.jaxws"><!-- --></A>
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155 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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156 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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157 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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158 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/data/msa/jaxws/package-summary.html">compbio.data.msa.jaxws</A></FONT></TH>
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164 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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165 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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166 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/jaxws/package-summary.html">compbio.data.msa.jaxws</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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168 <TR BGCOLOR="white" CLASS="TableRowColor">
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169 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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170 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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171 <TD><CODE><B>GetJobStatusResponse.</B><B><A HREF="../../../compbio/data/msa/jaxws/GetJobStatusResponse.html#getReturn()">getReturn</A></B>()</CODE>
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174 </TD>
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180 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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181 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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182 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/data/msa/jaxws/package-summary.html">compbio.data.msa.jaxws</A> with parameters of type <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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184 <TR BGCOLOR="white" CLASS="TableRowColor">
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185 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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186 <CODE> void</CODE></FONT></TD>
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187 <TD><CODE><B>GetJobStatusResponse.</B><B><A HREF="../../../compbio/data/msa/jaxws/GetJobStatusResponse.html#setReturn(compbio.metadata.JobStatus)">setReturn</A></B>(<A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> _return)</CODE>
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190 </TD>
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195 <A NAME="compbio.engine"><!-- --></A>
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196 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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197 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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198 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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199 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/engine/package-summary.html">compbio.engine</A></FONT></TH>
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205 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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206 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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207 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/package-summary.html">compbio.engine</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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209 <TR BGCOLOR="white" CLASS="TableRowColor">
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210 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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211 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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212 <TD><CODE><B>SyncExecutor.</B><B><A HREF="../../../compbio/engine/SyncExecutor.html#getJobStatus()">getJobStatus</A></B>()</CODE>
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215 Query the status of the job by its id.</TD>
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217 <TR BGCOLOR="white" CLASS="TableRowColor">
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218 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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219 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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220 <TD><CODE><B>AsyncExecutor.</B><B><A HREF="../../../compbio/engine/AsyncExecutor.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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223 Query the status of the job</TD>
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228 <A NAME="compbio.engine.client"><!-- --></A>
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229 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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230 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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231 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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232 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/engine/client/package-summary.html">compbio.engine.client</A></FONT></TH>
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238 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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239 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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240 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/client/package-summary.html">compbio.engine.client</A> with parameters of type <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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242 <TR BGCOLOR="white" CLASS="TableRowColor">
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243 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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244 <CODE>static boolean</CODE></FONT></TD>
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245 <TD><CODE><B>Util.</B><B><A HREF="../../../compbio/engine/client/Util.html#isMarked(java.lang.String, compbio.metadata.JobStatus)">isMarked</A></B>(java.lang.String workDirectory,
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246 <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> marker)</CODE>
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249 </TD>
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251 <TR BGCOLOR="white" CLASS="TableRowColor">
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252 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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253 <CODE>static boolean</CODE></FONT></TD>
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254 <TD><CODE><B>Util.</B><B><A HREF="../../../compbio/engine/client/Util.html#writeMarker(java.lang.String, compbio.metadata.JobStatus)">writeMarker</A></B>(java.lang.String workDirectory,
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255 <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> fileType)</CODE>
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258 </TD>
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263 <A NAME="compbio.engine.cluster.drmaa"><!-- --></A>
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264 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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265 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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266 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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267 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/engine/cluster/drmaa/package-summary.html">compbio.engine.cluster.drmaa</A></FONT></TH>
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273 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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274 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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275 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/cluster/drmaa/package-summary.html">compbio.engine.cluster.drmaa</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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277 <TR BGCOLOR="white" CLASS="TableRowColor">
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278 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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279 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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280 <TD><CODE><B>JobRunner.</B><B><A HREF="../../../compbio/engine/cluster/drmaa/JobRunner.html#getJobStatus()">getJobStatus</A></B>()</CODE>
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283 </TD>
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285 <TR BGCOLOR="white" CLASS="TableRowColor">
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286 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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287 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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288 <TD><CODE><B>AsyncJobRunner.</B><B><A HREF="../../../compbio/engine/cluster/drmaa/AsyncJobRunner.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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291 This will never return clust.engine.JobStatus.CANCELLED as for sun grid
292 engine cancelled job is the same as failed.</TD>
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297 <A NAME="compbio.engine.local"><!-- --></A>
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298 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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299 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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300 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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301 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/engine/local/package-summary.html">compbio.engine.local</A></FONT></TH>
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307 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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308 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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309 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/engine/local/package-summary.html">compbio.engine.local</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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311 <TR BGCOLOR="white" CLASS="TableRowColor">
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312 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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313 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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314 <TD><CODE><B>LocalRunner.</B><B><A HREF="../../../compbio/engine/local/LocalRunner.html#getJobStatus()">getJobStatus</A></B>()</CODE>
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317 </TD>
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319 <TR BGCOLOR="white" CLASS="TableRowColor">
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320 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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321 <CODE>static <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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322 <TD><CODE><B>LocalEngineUtil.</B><B><A HREF="../../../compbio/engine/local/LocalEngineUtil.html#getJobStatus(java.util.concurrent.Future)">getJobStatus</A></B>(java.util.concurrent.Future<<A HREF="../../../compbio/engine/client/ConfiguredExecutable.html" title="interface in compbio.engine.client">ConfiguredExecutable</A><?>> future)</CODE>
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325 </TD>
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327 <TR BGCOLOR="white" CLASS="TableRowColor">
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328 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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329 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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330 <TD><CODE><B>AsyncLocalRunner.</B><B><A HREF="../../../compbio/engine/local/AsyncLocalRunner.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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333 </TD>
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335 <TR BGCOLOR="white" CLASS="TableRowColor">
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336 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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337 <CODE>static <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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338 <TD><CODE><B>LocalEngineUtil.</B><B><A HREF="../../../compbio/engine/local/LocalEngineUtil.html#getRecordedJobStatus(java.lang.String)">getRecordedJobStatus</A></B>(java.lang.String jobId)</CODE>
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341 </TD>
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346 <A NAME="compbio.metadata"><!-- --></A>
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347 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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348 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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349 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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350 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/metadata/package-summary.html">compbio.metadata</A></FONT></TH>
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356 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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357 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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358 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/metadata/package-summary.html">compbio.metadata</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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360 <TR BGCOLOR="white" CLASS="TableRowColor">
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361 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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362 <CODE>static <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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363 <TD><CODE><B>JobStatus.</B><B><A HREF="../../../compbio/metadata/JobStatus.html#valueOf(java.lang.String)">valueOf</A></B>(java.lang.String name)</CODE>
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366 Returns the enum constant of this type with the specified name.</TD>
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368 <TR BGCOLOR="white" CLASS="TableRowColor">
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369 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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370 <CODE>static <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A>[]</CODE></FONT></TD>
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371 <TD><CODE><B>JobStatus.</B><B><A HREF="../../../compbio/metadata/JobStatus.html#values()">values</A></B>()</CODE>
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374 Returns an array containing the constants of this enum type, in
375 the order they are declared.</TD>
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380 <A NAME="compbio.ws.server"><!-- --></A>
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381 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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382 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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383 <TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2">
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384 Uses of <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A> in <A HREF="../../../compbio/ws/server/package-summary.html">compbio.ws.server</A></FONT></TH>
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390 <TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY="">
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391 <TR BGCOLOR="#CCCCFF" CLASS="TableSubHeadingColor">
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392 <TH ALIGN="left" COLSPAN="2">Methods in <A HREF="../../../compbio/ws/server/package-summary.html">compbio.ws.server</A> that return <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></FONT></TH>
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394 <TR BGCOLOR="white" CLASS="TableRowColor">
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395 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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396 <CODE>static <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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397 <TD><CODE><B>WSUtil.</B><B><A HREF="../../../compbio/ws/server/WSUtil.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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400 </TD>
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402 <TR BGCOLOR="white" CLASS="TableRowColor">
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403 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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404 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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405 <TD><CODE><B>TcoffeeWS.</B><B><A HREF="../../../compbio/ws/server/TcoffeeWS.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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408 </TD>
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410 <TR BGCOLOR="white" CLASS="TableRowColor">
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411 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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412 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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413 <TD><CODE><B>ProbconsWS.</B><B><A HREF="../../../compbio/ws/server/ProbconsWS.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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416 </TD>
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418 <TR BGCOLOR="white" CLASS="TableRowColor">
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419 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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420 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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421 <TD><CODE><B>MuscleWS.</B><B><A HREF="../../../compbio/ws/server/MuscleWS.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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424 </TD>
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426 <TR BGCOLOR="white" CLASS="TableRowColor">
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427 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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428 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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429 <TD><CODE><B>MafftWS.</B><B><A HREF="../../../compbio/ws/server/MafftWS.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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432 </TD>
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434 <TR BGCOLOR="white" CLASS="TableRowColor">
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435 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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436 <CODE> <A HREF="../../../compbio/metadata/JobStatus.html" title="enum in compbio.metadata">JobStatus</A></CODE></FONT></TD>
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437 <TD><CODE><B>ClustalWS.</B><B><A HREF="../../../compbio/ws/server/ClustalWS.html#getJobStatus(java.lang.String)">getJobStatus</A></B>(java.lang.String jobId)</CODE>
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