1 <?xml version="1.0" encoding="UTF-8"?>
\r
2 <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
\r
3 <html xmlns="http://www.w3.org/1999/xhtml">
\r
6 <meta name="Last-modified" content="Fri, 28 Jun 2013 12:00:00 GMT"/>
\r
7 <title>Java Bioinformatics Analyses Web Services (JABAWS): Manual</title>
\r
8 <link href="ws.css" rel="stylesheet" type="text/css" media="screen, projection, handheld, tv" />
\r
9 <link href="print.css" rel="stylesheet" type="text/css" media="print" />
\r
10 <link href='http://fonts.googleapis.com/css?family=Yanone+Kaffeesatz:700' rel='stylesheet' type='text/css' />
\r
11 <script type="text/javascript" src="prototype-1.6.0.3.js"></script>
\r
20 <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>
\r
21 <td class="bg"><img src="images/jabaws21.png" width="256" height="67" alt="JABAWS-2.1" title="Java Bioinformatics Analysis Web Services version 2.1"/></td>
\r
22 <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>
\r
30 <div id="supermenu">
\r
31 <a class="newa" href="index.html">Home</a>
\r
32 <a class="newa" href="quick_start.html">Getting Started</a>
\r
33 <a class="newpressed" href="man_about.html">Manual</a>
\r
35 <div id="supersubmenu">
\r
36 <a class="newa" href="man_about.html">About</a>
\r
37 <a class="newa" href="man_servervm.html" title="JABAWS Server as Virtual Appliance">Server VA</a>
\r
38 <a class="newa" href="man_awscloud.html" title="JABAWS Server in the Amazon EC2 Cloud">Server in the Cloud</a>
\r
39 <div id="subsubmenu">
\r
40 <a class="newa" href="man_awscloud_ec2.html" >EC2 Server</a>
\r
41 <a class="newpressed" href="man_awscloud_bs.html" >Elastic Beanstalk</a>
\r
43 <a class="newa" href="man_serverwar.html" title="JABAWS Server as Web Application aRchive">Server WAR</a>
\r
44 <a class="newa" href="man_configuration.html" >Configure JABAWS</a>
\r
45 <a class="newa" href="man_client.html" title="JABAWS Command Line Client">Command Client</a>
\r
46 <a class="newa" href="man_stats.html" title="JABAWS Usage Statistics">Usage Statistics</a>
\r
47 <a class="newa" href="man_dev.html" title="Accessing JABAWS from your program">Accessing JABAWS</a>
\r
48 <a class="newa" href="man_server_dev.html" >Develop JABAWS</a>
\r
55 <h2 id="headtitle">JABAWS MANUAL</h2>
\r
57 <h2>How to use JABAWS on Amazon Elastic Beanstalk</h2>
\r
58 <div id="jabaws_on_cloud">
\r
60 <li><a href="https://www.amazon.com/ap/signin/175-8261537-7969810?_encoding=UTF8&openid.assoc_handle=aws&openid.return_to=https%3A//aws-portal.amazon.com/gp/aws/developer/registration/index.html/175-8261537-7969810&openid.mode=checkid_setup&openid.ns=http%3A//specs.openid.net/auth/2.0&openid.claimed_id=http%3A//specs.openid.net/auth/2.0/identifier_select&openid.pape.max_auth_age=600&siteState=awsMode%3A%3Aregistration%3A%3AheaderMessage%3A%3AAmazon Web Services Sign Up%3A%3A&pageId=aws.ssop&openid.pape.preferred_auth_policies=http%3A//schemas.openid.net/pape/policies/2007/06/multi-factor-physical&marketplaceId=ATVPDKIKX0DER&accountStatusPolicy=P1&openid.ns.pape=http%3A//specs.openid.net/extensions/pape/1.0&openid.identity=http%3A//specs.openid.net/auth/2.0/identifier_select&authCookies=1">Create Amazon Web Services account</a>.
\r
62 <li><a href="https://console.aws.amazon.com/ec2/home?region=eu-west-1#selectInstance=&launchAmi=&s=Home">Log in into the Amazon Web Services (AWS) console</a> and switch to AWS Elastic Beanstalk view.
\r
63 <img src="images/aws_bs_launch.gif" alt="Elastic Beanstalk launch JABAWS war step 1" width="852" height="418" />
\r
65 <li>Create a new Beanstalk application by uploading JABAWS war file:
\r
66 <img src="images/aws_bs_launch1.gif" alt="Elastic Beanstalk launch JABAWS war step 2" width="532" height="388" />
\r
68 <li>Give a name to your JABAWS instance. This name will be a part of the access URL for your JABAWS.
\r
69 <img src="images/aws_bs_launch2.gif" alt="Elastic Beanstalk launch JABAWS war step 3" width="530" height="492" />
\r
71 <li>Choose the type of hardware you want to run JABAWS on.
\r
72 <img src="images/aws_bs_launch3.gif" alt="Elastic Beanstalk launch JABAWS war step 4" />
\r
74 <li>If everything goes well you should be able to access your JABAWS on http://jabaws.elasticbeanstalk.com
\r
75 <img src="images/aws_bs_done.gif" alt="Elastic Beanstalk launch JABAWS war " width="682" height="422" />
\r
79 </div><!-- end of jabaws_on_cloud div -->
\r
80 </div><!-- content end-->
\r
81 <div id="copyright">Last update: 30 April 2014<br/>Sasha Sherstnev, Peter Troshin, Jim Procter and Geoff Barton, The Barton Group, University of Dundee, UK</div>
\r
82 </div><!-- wrapper end-->
\r
83 </div><!-- page end-->
\r
85 <!-- Google analitics -->
\r
86 <script type="text/javascript">
\r
87 var gaJsHost = (("https:" == document.location.protocol) ? "https://ssl." : "http://www.");
\r
88 document.write(unescape("%3Cscript src='" + gaJsHost + "google-analytics.com/ga.js' type='text/javascript'%3E%3C/script%3E"));
\r
90 <script type="text/javascript">
\r
92 var pageTracker = _gat._getTracker("UA-5356328-1");
\r
93 pageTracker._trackPageview();
\r