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5 <meta name="Last-modified" content="Fri, 28 Jun 2013 12:00:00 GMT"/>
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6 <title>Java Bioinformatics Analyses Web Services (JABAWS) manual - getting started</title>
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17 <td style="width:158px;"><a href="http://www.dundee.ac.uk"><img src="images/uod_lt_long.gif" width="158" height="90" alt="University of Dundee" class="logo" title="University of Dundee" longdesc="http://www.dundee.ac.uk"/></a></td>
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18 <td class="bg"><img src="images/jabaws201-2.png" width="263" height="60" alt="JABAWS-2.0.1" title="Java Bioinformatics Analysis Web Services version 2.0.1"/></td>
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19 <td class="bg"><img src="images/banner_right.png" alt="Disorder" width="200" height="80"/></td>
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28 <a href="index.html">Home</a>
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29 <a class="selected" href="quick_start.html">Getting Started</a>
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30 <a href="man_about.html">Manual</a>
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31 <a href="http://www.compbio.dundee.ac.uk/download">Download</a>
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32 <a href="PublicAnnualStat" title="JABAWS server usage statistics">Usage Statistics</a>
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33 <a href="ServiceStatus" title="JABAWS webservices status. Click to test all web services. Please be patient while the services are being checked">Services Status</a>
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34 <a href="contacts.html">Contact Us</a>
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35 <a href="http://www.compbio.dundee.ac.uk" title="University of Dundee, The Barton Group" >Barton Group</a></div>
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40 <h2 id="headtitle">Getting Started</h2>
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41 <h3><a name="whichjaba" id="whichjaba"></a>Choose a JABAWS distribution</h3>
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42 <table id="choicematrix">
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44 <th>I want to use JABAWS for...</th>
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45 <th>Quick Guide</th>
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48 <td>Running Muptiple Sequence Alignments through Jalview on my <strong>own</strong> computer</td>
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49 <td><a href="manual_qs_va.html#qsc">JABAWS Virtual Appliance (VA)</a></td>
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52 <td>Running JABAWS on the <strong>cloud</strong>, for one or many users</td>
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53 <td><a href="manual_qs_amazon.html#qsc">JABAWS on the Amazon cloud </a></td>
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56 <td>Running JABAWS for my group, lab, or organization on the <strong>local</strong> infrastructure </td>
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57 <td><a href="manual_qs_war.html#qsc">JABAWS Web Application aRchive (WAR)</a></td>
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60 <td>Accessing a JABAWS server from my own code</td>
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61 <td><a href="manual_qs_client.html#qsc">JABAWS Java Client</a></td>
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67 <h3>Running JABAWS in the Amazon Cloud</h3>
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69 <li><a href="https://www.amazon.com/ap/signin/175-8261537-7969810?_encoding=UTF8&openid.assoc_handle=aws&openid.return_to=https%3A//aws-portal.amazon.com/gp/aws/developer/registration/index.html/175-8261537-7969810&openid.mode=checkid_setup&openid.ns=http%3A//specs.openid.net/auth/2.0&openid.claimed_id=http%3A//specs.openid.net/auth/2.0/identifier_select&openid.pape.max_auth_age=600&siteState=awsMode%3A%3Aregistration%3A%3AheaderMessage%3A%3AAmazon Web Services Sign Up%3A%3A&pageId=aws.ssop&openid.pape.preferred_auth_policies=http%3A//schemas.openid.net/pape/policies/2007/06/multi-factor-physical&marketplaceId=ATVPDKIKX0DER&accountStatusPolicy=P1&openid.ns.pape=http%3A//specs.openid.net/extensions/pape/1.0&openid.identity=http%3A//specs.openid.net/auth/2.0/identifier_select&authCookies=1">Create Amazon Web Services account</a>. </li>
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70 <li>Configure JABAWS either on the <a href="man_awscloud_ec2.html">Amazon EC2 cloud</a> or on <a href="man_awscloud_bs.html">Amazon Elastic Beanstalk</a></li>
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72 </div><!-- about end-->
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73 </div><!-- content end-->
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74 <div id="copyright">Last update: 28 June 2013<br/>Sasha Sherstnev, Peter Troshin, Jim Procter and Geoff Barton, The Barton Group, University of Dundee, UK</div>
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