website/tests/Failed suite [Ant suite]/methods-not-run.html

   1 <h2>Methods that were not run</h2><table>
   2 <tr><td>compbio.metadata.OptionCombinatorTester.testgetAllParameters</td></tr>
   3 <tr><td>compbio.runner.msa.MafftParametersTester.testParameters</td></tr>
   4 <tr><td>compbio.runner.msa.MuscleParametersTester.testConstrainedParametersMinValues</td></tr>
   5 <tr><td>compbio.runner.msa.ProbconsParametersTester.testArguments</td></tr>
   6 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMinValues</td></tr>
   7 <tr><td>compbio.runner.msa.MafftTester.testExecute</td></tr>
   8 <tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateClustalConfiguration</td></tr>
   9 <tr><td>compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusShortPoolingTime</td></tr>
  10 <tr><td>compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersMinValues</td></tr>
  11 <tr><td>compbio.metadata.RunnerConfigTester.testOptionSetInvalidValue</td></tr>
  12 <tr><td>compbio.metadata.OptionMarshallerTester.testMarshalling</td></tr>
  13 <tr><td>compbio.engine.FilePullerTester.testGetDelay</td></tr>
  14 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testParameters</td></tr>
  15 <tr><td>compbio.runner.msa.ProbconsTester.testConfigurationLoading</td></tr>
  16 <tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testValidation</td></tr>
  17 <tr><td>compbio.runner.msa.MuscleParametersTester.testParameters</td></tr>
  18 <tr><td>compbio.runner.msa.MafftTester.testPersistance</td></tr>
  19 <tr><td>compbio.metadata.RunnerConfigTester.testParameterToCommand</td></tr>
  20 <tr><td>compbio.metadata.RunnerConfigTester.testOptionNoDefaultValidate</td></tr>
  21 <tr><td>compbio.runner.msa.MafftParametersTester.testConstrainedParametersMinValues</td></tr>
  22 <tr><td>compbio.runner.msa.MafftTester.testClusterExecute</td></tr>
  23 <tr><td>compbio.runner.msa.TcoffeeTester.testConfigurationLoading</td></tr>
  24 <tr><td>compbio.runner.msa.ClustalWParametersTester.testParameters</td></tr>
  25 <tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateMuscleConfiguration</td></tr>
  26 <tr><td>compbio.runner.msa.LimitTester.testLoadLimits</td></tr>
  27 <tr><td>compbio.metadata.PresetTester.marshallPreset</td></tr>
  28 <tr><td>compbio.runner.msa.TcoffeeTester.readStatistics</td></tr>
  29 <tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateTcoffeeConfiguration</td></tr>
  30 <tr><td>compbio.runner.msa.MafftParametersTester.testConstrainedParametersRandomValues</td></tr>
  31 <tr><td>compbio.metadata.RunnerConfigTester.testValidateValueConstrain</td></tr>
  32 <tr><td>compbio.runner.msa.MafftTester.testRunOnClusterAsyncCheckStatusLongPoolingTime</td></tr>
  33 <tr><td>compbio.runner.msa.MafftParametersTester.testOptions</td></tr>
  34 <tr><td>compbio.runner.msa.ProbconsTester.testSetInputTester</td></tr>
  35 <tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testUnMarshalling</td></tr>
  36 <tr><td>compbio.runner.msa.MuscleParametersTester.testConstrainedParametersRandomValues</td></tr>
  37 <tr><td>compbio.runner.msa.MuscleTester.testPersistance</td></tr>
  38 <tr><td>compbio.metadata.RunnerConfigTester.testCreateNumParameterWithoutValidValue</td></tr>
  39 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersRandomValues</td></tr>
  40 <tr><td>compbio.runner.msa.ClustalWParametersTester.testOptions</td></tr>
  41 <tr><td>compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMaxValues</td></tr>
  42 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testOptions</td></tr>
  43 <tr><td>compbio.runner.msa.ProbconsParametersTester.testConfiguration</td></tr>
  44 <tr><td>compbio.runner.msa.ProbconsParametersTester.testDefaultParameters</td></tr>
  45 <tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testSchemaFromCodeGeneration</td></tr>
  46 <tr><td>compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersRandomValues</td></tr>
  47 <tr><td>compbio.runner.msa.MuscleParametersTester.testOptions</td></tr>
  48 <tr><td>compbio.metadata.RunnerConfigTester.testOptionToCommand</td></tr>
  49 <tr><td>compbio.runner.msa.MafftTester.readStatistics</td></tr>
  50 <tr><td>compbio.runner.msa.MafftParametersTester.testDefaultParameters</td></tr>
  51 <tr><td>compbio.runner.msa.MafftParametersTester.testConfiguration</td></tr>
  52 <tr><td>compbio.runner.msa.MafftTester.testSetInputTester</td></tr>
  53 <tr><td>compbio.metadata.RunnerConfigTester.testCreateParameter</td></tr>
  54 <tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testValidationOnMarshalling</td></tr>
  55 <tr><td>compbio.engine.conf.RunnerConfigMarshallerTester.testMarshalling</td></tr>
  56 <tr><td>compbio.runner.msa.TcoffeeTester.testNcore</td></tr>
  57 <tr><td>compbio.metadata.OptionCombinatorTester.testgetAllOptions</td></tr>
  58 <tr><td>compbio.runner.msa.MafftParametersTester.testConstrainedParametersMaxValues</td></tr>
  59 <tr><td>compbio.engine.FilePullerTester.testPull</td></tr>
  60 <tr><td>compbio.runner.msa.MuscleTester.testRunLocally</td></tr>
  61 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testDefaultParameters</td></tr>
  62 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testConfiguration</td></tr>
  63 <tr><td>compbio.runner.msa.ProbconsParametersTester.testOptions</td></tr>
  64 <tr><td>compbio.runner.msa.ClustalWParametersTester.testConstrainedParametersMaxValues</td></tr>
  65 <tr><td>compbio.runner.msa.MuscleParametersTester.testDefaultParameters</td></tr>
  66 <tr><td>compbio.runner.msa.MuscleParametersTester.testConfiguration</td></tr>
  67 <tr><td>compbio.runner.msa.MuscleParametersTester.testConstrainedParametersMaxValues</td></tr>
  68 <tr><td>compbio.runner.msa.MuscleTester.testRunOnCluster</td></tr>
  69 <tr><td>compbio.metadata.RunnerConfigTester.testValidateBoundaryConstrainCheck</td></tr>
  70 <tr><td>compbio.runner.msa.ClustalWParametersTester.testConfiguration</td></tr>
  71 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testConstrainedParametersMaxValues</td></tr>
  72 <tr><td>compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersRandomValues</td></tr>
  73 <tr><td>compbio.runner.msa.ClustalWParametersTester.testDefaultParameters</td></tr>
  74 <tr><td>compbio.runner.msa.MuscleTester.testConfigurationLoading</td></tr>
  75 <tr><td>compbio.engine.conf.PropertyHelperManagerTester.testClusterEngineConf</td></tr>
  76 <tr><td>compbio.runner.msa.MafftParametersTester.testPresets</td></tr>
  77 <tr><td>compbio.runner.msa.TcoffeeTester.testExecute</td></tr>
  78 <tr><td>compbio.metadata.RunnerConfigTester.testValidate</td></tr>
  79 <tr><td>compbio.metadata.PresetTester.validatePresets</td></tr>
  80 <tr><td>compbio.engine.FilePullerTester.testCache</td></tr>
  81 <tr><td>compbio.runner.msa.MuscleTester.readStatistics</td></tr>
  82 <tr><td>compbio.runner.msa.ClustalWParametersTester.testArguments</td></tr>
  83 <tr><td>compbio.metadata.OptionMarshallerTester.testUnMarshalling</td></tr>
  84 <tr><td>compbio.metadata.RunnerConfigTester.testCreateParameterWithValidValueConstrain</td></tr>
  85 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testArguments</td></tr>
  86 <tr><td>compbio.engine.conf.PropertyHelperManagerTester.validateMafftConfiguration</td></tr>
  87 <tr><td>compbio.runner.msa.MuscleParametersTester.testArguments</td></tr>
  88 <tr><td>compbio.runner.msa.ProbconsParametersTester.testConstrainedParametersMinValues</td></tr>
  89 <tr><td>compbio.runner.msa.ProbconsTester.testExecute</td></tr>
  90 <tr><td>compbio.metadata.RunnerConfigTester.testValidateLowerBoundaryConstrainCheck</td></tr>
  91 <tr><td>compbio.runner.msa.TcoffeeTester.testPersistance</td></tr>
  92 <tr><td>compbio.engine.conf.PropertyHelperManagerTester.testLocalEngineConf</td></tr>
  93 <tr><td>compbio.runner.msa.ProbconsTester.testClusterExecute</td></tr>
  94 <tr><td>compbio.metadata.RunnerConfigTester.testValidateUpperBoundaryConstrainCheck</td></tr>
  95 <tr><td>compbio.runner.msa.TcoffeeParametersTester.testPresets</td></tr>
  96 <tr><td>compbio.runner.msa.MuscleTester.testRunOnClusterAsync</td></tr>
  97 <tr><td>compbio.runner.msa.MuscleParametersTester.testPresets</td></tr>
  98 <tr><td>compbio.runner.msa.MafftParametersTester.testArguments</td></tr>
  99 <tr><td>compbio.runner.msa.MafftTester.testConfigurationLoading</td></tr>
 100 <tr><td>compbio.runner.msa.ProbconsParametersTester.testParameters</td></tr>
 101 <tr><td>compbio.engine.FilePullerTester.testGet</td></tr>
 102 <tr><td>compbio.runner.msa.ProbconsTester.testPersistance</td></tr>
 103 <tr><td>compbio.runner.msa.ClustalWParametersTester.testPresets</td></tr>
 104 <tr><td>compbio.runner.msa.TcoffeeTester.testClusterExecute</td></tr>
 105 </table>