3 <title>TestNG: compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester</title>
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56 <h2 align='center'>compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester</h2><table border='1' align="center">
58 <td>Tests passed/Failed/Skipped:</td><td>3/0/0</td>
60 <td>Started on:</td><td>Mon Dec 21 16:16:04 GMT 2009</td>
62 <tr><td>Total time:</td><td>31 seconds (31283 ms)</td>
64 <td>Included groups:</td><td></td>
66 <td>Excluded groups:</td><td></td>
69 <small><i>(Hover the method name to see the test class name)</i></small><p/>
70 <table width='100%' border='1' class='invocation-passed'>
71 <tr><td colspan='4' align='center'><b>PASSED TESTS</b></td></tr>
72 <tr><td><b>Test method</b></td>
73 <td><b>Instance</b></td>
74 <td width="10%"><b>Time (seconds)</b></td>
75 <td width="30%"><b>Exception</b></td>
78 <td title='compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testCancel()'><b>testCancel</b><br>Test class:compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester</td>
79 <td>compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester@2c76e369</td><td>0</td>
80 <td><div><pre>compbio.engine.ResultNotAvailableException: Result for the jobId /homes/pvtroshin/workspace/clustengine/testoutput/local/ClustalW#556313082813930709 with file name TO1381.clustal.cluster.out is not found!
81 at compbio.data.sequence.ClustalAlignmentUtil.readClustalFile(ClustalAlignmentUtil.java:258)
82 at compbio.runner.clustal.ClustalW.getResults(ClustalW.java:54)
83 at compbio.runner.clustal.ClustalW.getResults(ClustalW.java:15)
84 at compbio.runner.ConfExecutable.getResults(ConfExecutable.java:158)
85 at compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testCancel(DrmaaAsyncClusterEngineTester.java:94)
86 ... Removed 22 stack frames</pre></div><a href='#' onClick='toggleBox("stack-trace270071071", this, "Click to show all stack frames", "Click to hide stack frames")'>Click to show all stack frames</a>
87 <div class='stack-trace' id='stack-trace270071071'><pre>compbio.engine.ResultNotAvailableException: Result for the jobId /homes/pvtroshin/workspace/clustengine/testoutput/local/ClustalW#556313082813930709 with file name TO1381.clustal.cluster.out is not found!
88 at compbio.data.sequence.ClustalAlignmentUtil.readClustalFile(ClustalAlignmentUtil.java:258)
89 at compbio.runner.clustal.ClustalW.getResults(ClustalW.java:54)
90 at compbio.runner.clustal.ClustalW.getResults(ClustalW.java:15)
91 at compbio.runner.ConfExecutable.getResults(ConfExecutable.java:158)
92 at compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testCancel(DrmaaAsyncClusterEngineTester.java:94)
93 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
94 at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
95 at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
96 at java.lang.reflect.Method.invoke(Method.java:597)
97 at org.testng.internal.MethodHelper.invokeMethod(MethodHelper.java:609)
98 at org.testng.internal.Invoker.invokeMethod(Invoker.java:532)
99 at org.testng.internal.Invoker.invokeTestMethod(Invoker.java:686)
100 at org.testng.internal.Invoker.invokeTestMethods(Invoker.java:1018)
101 at org.testng.internal.TestMethodWorker.invokeTestMethods(TestMethodWorker.java:128)
102 at org.testng.internal.TestMethodWorker.run(TestMethodWorker.java:112)
103 at org.testng.TestRunner.runWorkers(TestRunner.java:759)
104 at org.testng.TestRunner.privateRun(TestRunner.java:592)
105 at org.testng.TestRunner.run(TestRunner.java:486)
106 at org.testng.SuiteRunner.runTest(SuiteRunner.java:332)
107 at org.testng.SuiteRunner.runSequentially(SuiteRunner.java:327)
108 at org.testng.SuiteRunner.privateRun(SuiteRunner.java:299)
109 at org.testng.SuiteRunner.run(SuiteRunner.java:204)
110 at org.testng.TestNG.createAndRunSuiteRunners(TestNG.java:912)
111 at org.testng.TestNG.runSuitesLocally(TestNG.java:876)
112 at org.testng.TestNG.run(TestNG.java:784)
113 at org.testng.TestNG.privateMain(TestNG.java:949)
114 at org.testng.TestNG.main(TestNG.java:922)
118 <td title='compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testGetJobStatus()'><b>testGetJobStatus</b><br>Test class:compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester</td>
119 <td>compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester@2c76e369</td><td>11</td>
123 <td title='compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester.testSubmit()'><b>testSubmit</b><br>Test class:compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester</td>
124 <td>compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester@2c76e369</td><td>18</td>