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Job Description | FER_CAPAN_1-144 | Confidence | 13.27% | Date | Wed Jan 4 12:02:18 GMT 2017 |
Rank | 100 | Aligned Residues | 76 |
% Identity | 16% | Template | c2mlbA_ |
PDB info |
PDB header:de novo protein | Chain: A: PDB Molecule:redesigned ubiquitin; |
PDBTitle: nmr solution structure of a computational designed protein based on2 template of human erythrocytic ubiquitin
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Resolution | UNK |
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60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | V | K | L | I | T | P | D | G | . |
P | I | E | F | D | C | P | D | N | V | Y | I | L | D | Q | A | E | E | A | G | H | D | L | P | Y | S | C | R | A | G | S | C | S | S | C | A | G | K | I | A | G | G | A | V | D | Q | T | D | G | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | I | N | I | T | L | P | D | G | K | T | L | T | L | T | V | T | P | E | F | T | V | K | E | L | A | E | E | I | . |
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A | R | R | L | G | L | S | P | E | D | I | K | L | T | H | N | G | K | T | L | D | P | S | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
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. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | L | D | D | D | Q | L | E | E | G | W | V | L | T | C | V | A | Y | P | Q | S | D | V | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | L | A | E | Y | G | I | T | P | G | S | T | I | T | L | E | I | K | K | K | G | G | L | E |
Template Known Secondary structure |   |
B | | | | | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
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