Return to main results Retrieve Phyre Job Id

Job DescriptionFER_CAPAN_1-144
Confidence13.27%DateWed Jan 4 12:02:18 GMT 2017
Rank100Aligned Residues76
% Identity16%Templatec2mlbA_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:redesigned ubiquitin; PDBTitle: nmr solution structure of a computational designed protein based on2 template of human erythrocytic ubiquitin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........ 60.........70.........80.........90.........100.........
Predicted Secondary structure 


.






























Query SS confidence 








.

















































Query Sequence  KVKLITPDG. PIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGN
Query Conservation   
      
.          





  


 
  


 
 



   
  
 
      
Alig confidence 








.


















.......























Template Conservation   
 
    
    
 
    

  

  
.......    

    
 
   
  
 
  
Template Sequence  TINITLPDGKTLTLTVTPEFTVKELAEEI. . . . . . . ARRLGLSPEDIKLTHNGKTLDPSL
Template Known Secondary structure 
TTS


TT
B.......T

TTTTT

TTS
Template Predicted Secondary structure 







.......









Template SS confidence 



























































   3......10.........20.........30. ........40.........50.....
 
   110.........120.........130...
Predicted Secondary structure 








Query SS confidence 























Query Sequence  FLDDDQLEEGWVLTCVAYPQSDVT
Query Conservation   
       
 

 
 
 
 


 
Alig confidence 























Template Conservation 

   

  
  
 
  
 


  
Template Sequence  TLAEYGITPGSTITLEIKKKGGLE
Template Known Secondary structure  BT

TT







Template Predicted Secondary structure 












Template SS confidence 























   56...60.........70.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D