![](../webimg/playing.png) |
Job Description | FER_CAPAN_1-144 | Confidence | 99.71% | Date | Wed Jan 4 12:02:18 GMT 2017 |
Rank | 27 | Aligned Residues | 90 |
% Identity | 22% | Template | c3ah7A_ |
PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:[2fe-2s]ferredoxin; |
PDBTitle: crystal structure of the isc-like [2fe-2s] ferredoxin (fdxb) from2 pseudomonas putida jcm 20004
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Resolution | 1.90 Å |
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![](../webimg/jpeg_icon.jpg) |
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51 | . | . | . | . | . | . | . | . | |
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60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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Query SS confidence |   |
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Query Sequence |   |
K | V | K | L | I | T | P | D | G | . |
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P | I | E | F | D | C | P | D | N | V | Y | I | L | D | Q | A | E | E | A | G | H | D | L | P | Y | S | C | R | . |
A | G | S | C | S | S | C | A | G | K | I | A | G | G | A | V | D | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | V | T | F | L | P | H | E | K | F | C | P | E | G | L | T | V | E | V | K | P | G | T | N | I | L | E | L | A | H | D | H | H | I | E | M | E | S | A | C | G | G | V | K | A | C | T | T | C | H | C | I | V | R | K | G | F | D | S | L |
Template Known Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| B | T | T | T | B | T | T |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| T | T |
| B | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T |
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| S | S | S | S |
| S | T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | S | G | G | G | S |
Template Predicted Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
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106 | . | . | . | 110 | . | . | . | . | |
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. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
. | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | . | . | . | . | . | . | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Query SS confidence |   |
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Query Sequence |   |
T | D | G | N | F | L | D | D | D | . |
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Q | L | E | E | G | W | V | L | T | C | V | A | Y | P | Q | S | . |
D | V | T | I | E | T | H | K | E | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | E | A | D | E | L | E | E | D | M | L | D | K | A | W | G | L | E | A | Q | S | R | L | G | C | Q | V | F | V | A | D | E | D | L | T | I | E | I | P | K | Y | S |
Template Known Secondary structure |   |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T | S | T | T |
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| T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | G | G | G |
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| S | S |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Template Predicted Secondary structure |   |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
Template SS confidence |   |
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62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
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