![](../webimg/playing.png) |
Job Description | FER_CAPAN_1-144 | Confidence | 99.56% | Date | Wed Jan 4 12:02:18 GMT 2017 |
Rank | 39 | Aligned Residues | 96 |
% Identity | 14% | Template | c3huiA_ |
PDB info |
PDB header:electron transport | Chain: A: PDB Molecule:ferredoxin; |
PDBTitle: crystal structure of the mutant a105r of [2fe-2s] ferredoxin in the2 class i cyp199a2 system from rhodopseudomonas palustris
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Resolution | 2.01 Å |
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![](../webimg/jpeg_icon.jpg) |
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44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
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. | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Query SS confidence |   |
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Query Sequence |   |
V | T | C | M | A | S | Y | K | V | K | L | I | T | P | D | G | . |
P | I | E | F | D | C | P | D | N | V | Y | I | L | D | Q | A | E | E | A | G | H | D | . |
L | P | Y | S | C | R | . |
A | G | S | C | S | S | C | A | G | K | I | A | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | R | G | S | H | M | A | K | I | N | F | V | D | H | T | G | E | T | R | T | V | E | V | E | E | G | A | T | V | M | E | A | A | I | R | N | A | I | P | G | V | E | A | E | C | G | G | A | C | A | C | A | T | C | H | V | Y | V | D | E |
Template Known Secondary structure |   |
| T | T |
| S | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
| T | T | S |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | T | T | S | B | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T | T |
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| T | T | S | S | S | S |
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| S | T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Template Predicted Secondary structure |   |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Template SS confidence |   |
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-5 | . | . | . | . | 0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
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101 | |
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Predicted Secondary structure |   |
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| ![](../webimg/helix2small.png) | . | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_a.png) | . | . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/helix2small.png) |
Query SS confidence |   |
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Query Sequence |   |
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A | V | D | Q | T | D | G | N | F | L | D | D | . |
D | Q | L | E | E | G | W | V | L | T | C | V | A | Y | P | Q | S | D | V | . |
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T | I | E | T | H | K | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | W | R | E | K | V | G | G | P | S | P | M | E | E | D | M | L | D | F | G | Y | D | V | R | P | N | S | R | L | S | C | Q | I | K | V | S | N | E | L | D | G | L | I | V | T | T | P | E | R |
Template Known Secondary structure |   |
G | G | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T | S | S | S |
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| T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | G | G | G |
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| G | G | G | T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Template Predicted Secondary structure |   |
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| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
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Template SS confidence |   |
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55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
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