Job Description FER_CAPAN_1-144 Confidence 99.82% Date Wed Jan 4 12:02:18 GMT 2017 Rank 24 Aligned Residues 97 % Identity 22% Template c4p6vF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:na(+)-translocating nadh-quinone reductase subunit f; PDBTitle: crystal structure of the na+-translocating nadh: ubiquinone2 oxidoreductase from vibrio cholerae Resolution 3.50 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																			.																												.
Query SS confidence																			.																												.
Query Sequence		K	V	T	C	M	A	S	Y	K	V	K	L	I	T	P	D	G	.	P	I	E	F	D	C	P	D	N	V	Y	I	L	D	Q	A	E	E	A	G	H	D	L	P	Y	S	C	.	R	A	G	S	C	S	S	C	A	G	K	I	A	G
Query Conservation																			.																												.
Alig confidence																			.																												.
Template Conservation
Template Sequence		K	S	K	L	V	P	T	G	D	I	T	I	S	I	N	G	D	P	E	K	A	I	V	T	Q	P	G	G	K	L	L	T	A	L	A	G	A	G	V	F	V	S	S	A	C	G	G	G	G	S	C	G	Q	C	R	V	K	I	K	S
Template Known Secondary structure			T	T	T	S	S									S	S	S	S						S		S		S	B																S	S	S	S	S		S									S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		101	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		G	A	V	D	Q	.	.	T	D	G	N	F	L	D	D	D	Q	L	E	E	G	W	V	L	T	C	V	A	Y	P	Q	S	D	V	T	I	E	T	H	K	E
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		G	G	G	D	I	L	P	T	E	L	D	H	I	S	K	G	E	A	R	E	G	E	R	L	A	C	Q	V	A	V	K	A	D	M	D	L	E	L	P	E	E
Template Known Secondary structure		S												T	S	S	S			T	T					T	T	T	S	B	S		S			B				S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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