|
Job Description | FER_CAPAN_1-144 | Confidence | 98.86% | Date | Wed Jan 4 12:02:18 GMT 2017 |
Rank | 43 | Aligned Residues | 70 |
% Identity | 23% | Template | d2fug33 |
SCOP info | beta-Grasp (ubiquitin-like)
| 2Fe-2S ferredoxin-like
| 2Fe-2S ferredoxin domains from multidomain proteins
|
Resolution | 3.30 |
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
| | | | |
|
|
| | | | | | |
|
|
|
|
| | | | | | | |
|
|
|
|
| | |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| | | | |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | L | I | T | P | D | G | P | I | E | F | D | C | P | D | N | V | Y | I | L | D | Q | A | E | E | A | G | H | D | L | P | Y | S | C | . |
. |
. |
. |
. |
. |
R | A | G | S | C | S | S | C | A | G | K | I | A | G | G | A | V | D | Q |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
| . | . | . | . | . | . |
|   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   | . | . |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |
Template Sequence |   |
V | R | V | K | V | N | D | R | . |
. |
I | V | E | V | P | P | G | T | S | V | M | D | A | V | F | H | A | G | Y | D | V | P | L | F | C | S | E | K | H | L | S | P | I | G | A | C | R | M | C | L | V | R | I | G | L | I | Q | W | Q | P |
Template Known Secondary structure |   |
| | | |
| S | S |
| . | . | | | | |
| T | T |
| B | | | | | | | | | T |
|
|
|
|
|
| S |
|
| T | T | S |
|
|
| S |
| S | T | T | S | | | | | |
|
|
| B |
| S |
Template Predicted Secondary structure |   |
| | | | |
|
| | . | . | | | | |
|
|
|
|
| | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | |
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
  |
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
| | | | |
|
|
| | | | | | | | | |
|
|
| | | | | |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | G | N | F | L | D | D | D | Q | L | E | E | G | W | V | L | T | C | V | A | Y | P | Q | S | D | V | T | I | E | T |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |
|   |
|
|
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |
|   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | A | A | S | C | V | T | A | V | A | D | G | M | V | V | D | T |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | S |
| | | T | T | T |
| B |
|
| T | T |
| | | |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
| | | | |
|
| | |
|
|
|
|
| | | |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
  |
|
|
|