![](../webimg/playing.png) |
Job Description | FER_CAPAN_1-144 | Confidence | 99.86% | Date | Wed Jan 4 12:02:18 GMT 2017 |
Rank | 21 | Aligned Residues | 95 |
% Identity | 25% | Template | d2piaa3 |
SCOP info | beta-Grasp (ubiquitin-like)
| 2Fe-2S ferredoxin-like
| 2Fe-2S ferredoxin domains from multidomain proteins
|
Resolution | 2.00 |
|
![](../webimg/jpeg_icon.jpg) |
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
|
|
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
|
|
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
|
|
|
|
|
|
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | N | G | G | K | V | T | C | M | A | S | Y | K | V | K | L | I | T | P | D | G | P | I | E | F | D | C | P | D | N | V | Y | I | L | D | Q | A | E | E | A | G | H | D | L | P | Y | S | C | R | A | G | S | C | S | S | C | A | G | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |
Template Sequence |   |
G | A | T | N | T | N | A | R | E | N | T | P | F | T | V | R | L | S | R | S | G | T | . |
. |
S | F | E | I | P | A | N | R | S | I | L | E | V | L | R | D | A | N | V | R | V | P | S | S | C | E | S | G | T | C | G | S | C | K | T | A |
Template Known Secondary structure |   |
|
|
|
|
|
|
| S |
|
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | T | T | T |
|
| . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
| T | T | S |
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | T | T |
|
|
|
|
| S |
| S | S | S | S | S |
| T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
| ![](../webimg/beta_a.png) | . | . | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
|
|
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
|
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
. | . | . | . | . | . |
Predicted Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
|
|
|
|
|
|
|
|
|
|
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) |
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
| . |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
I | A | G | G | A | V | D | Q | T | D | G | N | F | L | D | D | D | Q | L | E | E | G | W | V | L | T | C | V | A | Y | P | Q | S | . |
D | V | T | I | E | T |
Query Conservation |   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |
|   |
| . |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
| . | . |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|
|
|
|
|
Template Sequence |   |
L | C | S | G | E | A | D | H | R | D | M | V | L | R | D | D | E | . |
. |
K | G | T | Q | I | M | V | C | V | S | R | A | K | S | A | E | L | V | L | D | L |
Template Known Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | S |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
| S | S |
|
| T | T | T | . | . | T | T | T | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | T | T | T |
| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) | S | S | S | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
Template Predicted Secondary structure |   |
![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
|
|
|
|
| ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | ![](../webimg/helix2small.png) | . | . | ![](../webimg/helix2small.png) |
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
|
| ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_s.png) | ![](../webimg/beta_a.png) |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
284 | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | |
|
. | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
  |
No model constructed - rank, confidence too low
Phyre is for non-commercial use only
Commercial users please contact Michael Sternberg
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
  |
|
![](http://www.sbg.bio.ic.ac.uk/phyre2/html/images/Elixir_logo_small.png) |
|