Email tcnofoegbu@dundee.ac.uk Description FER_CAPAN_1-144 Date Wed Jan 4 12:02:18 GMT 2017 Unique Job ID 56da5616b4559c93

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c4n58A_ 100.0 54 PDB header:hydrolase Chain: A: PDB Molecule:pectocin m2; PDBTitle: crystal structure of pectocin m2 at 1.86 angstroms 2 d1a70a_ 100.0 71 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 3 d1offa_ 100.0 73 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 4 d1frra_ 99.9 62 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 5 d1pfda_ 99.9 70 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 6 d1frda_ 99.9 50 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 7 d1fxia_ 99.9 62 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 8 d1gaqb_ 99.9 71 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 9 d1iuea_ 99.9 48 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 10 d1awda_ 99.9 68 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 11 d1wria_ 99.9 59 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 12 d1czpa_ 99.9 64 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 13 d2cjoa_ 99.9 63 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 14 d4fxca_ 99.9 64 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 15 c4itkA_ 99.9 57 PDB header:electron transport Chain: A: PDB Molecule:apoferredoxin; PDBTitle: the structure of c.reinhardtii ferredoxin 2 16 c1krhA_ 99.9 25 PDB header:oxidoreductase Chain: A: PDB Molecule:benzoate 1,2-dioxygenase reductase; PDBTitle: x-ray stucture of benzoate dioxygenase reductase 17 d1krha3 99.9 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 18 d1jq4a_ 99.9 29 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 19 c4wqmA_ 99.9 28 PDB header:oxidoreductase Chain: A: PDB Molecule:toluene-4-monooxygenase electron transfer component; PDBTitle: structure of the toluene 4-monooxygenase nadh oxidoreductase t4mof,2 k270s k271s variant 20 c2piaA_ 99.9 22 PDB header:reductase Chain: A: PDB Molecule:phthalate dioxygenase reductase; PDBTitle: phthalate dioxygenase reductase: a modular structure for2 electron transfer from pyridine nucleotides to [2fe-2s] 21 d2piaa3 not modelled 99.9 25 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 22 d1doia_ not modelled 99.9 34 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 23 d1e0za_ not modelled 99.8 34 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 24 c4p6vF_ not modelled 99.8 22 PDB header:oxidoreductase Chain: F: PDB Molecule:na(+)-translocating nadh-quinone reductase subunit f; PDBTitle: crystal structure of the na+-translocating nadh: ubiquinone2 oxidoreductase from vibrio cholerae 25 c3zyyX_ not modelled 99.8 29 PDB header:iron-sulfur-binding protein Chain: X: PDB Molecule:iron-sulfur cluster binding protein; PDBTitle: reductive activator for corrinoid,iron-sulfur protein 26 c5frtC_ not modelled 99.8 26 PDB header:oxidoreductase Chain: C: PDB Molecule:dimeric (2fe-2s) protein; PDBTitle: structure of the fesii (shethna) protein of azotobacter vinelandii 27 c3ah7A_ not modelled 99.7 22 PDB header:metal binding protein Chain: A: PDB Molecule:[2fe-2s]ferredoxin; PDBTitle: crystal structure of the isc-like [2fe-2s] ferredoxin (fdxb) from2 pseudomonas putida jcm 20004 28 c2y5cB_ not modelled 99.7 20 PDB header:electron transport Chain: B: PDB Molecule:adrenodoxin-like protein, mitochondrial; PDBTitle: structure of human ferredoxin 2 (fdx2)in complex with 2fe2s2 cluster 29 c2mjdA_ not modelled 99.7 25 PDB header:metal binding protein Chain: A: PDB Molecule:adrenodoxin homolog, mitochondrial; PDBTitle: oxidized yeast adrenodoxin homolog 1 30 c2wlbB_ not modelled 99.7 28 PDB header:electron transport Chain: B: PDB Molecule:electron transfer protein 1, mitochondrial; PDBTitle: adrenodoxin-like ferredoxin etp1fd(516-618) of2 schizosaccharomyces pombe mitochondria 31 d1i7ha_ not modelled 99.6 27 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 32 d1e9ma_ not modelled 99.6 20 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 33 c3lxfC_ not modelled 99.6 24 PDB header:metal binding protein Chain: C: PDB Molecule:ferredoxin; PDBTitle: crystal structure of [2fe-2s] ferredoxin arx from novosphingobium2 aromaticivorans 34 c2mj3A_ not modelled 99.6 21 PDB header:metal binding protein Chain: A: PDB Molecule:iron-sulfur cluster binding protein; PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments and structure of2 iron-sulfur cluster binding protein from ehrlichia chaffeensis 35 d1xlqa1 not modelled 99.6 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 36 c4ltuB_ not modelled 99.6 19 PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: crystal structure of ferredoxin from rhodopseudomonas palustris haa2 37 d2bt6a1 not modelled 99.6 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 38 d1l5pa_ not modelled 99.6 16 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 39 c3huiA_ not modelled 99.6 14 PDB header:electron transport Chain: A: PDB Molecule:ferredoxin; PDBTitle: crystal structure of the mutant a105r of [2fe-2s] ferredoxin in the2 class i cyp199a2 system from rhodopseudomonas palustris 40 c3p1mG_ not modelled 99.5 20 PDB header:electron transport Chain: G: PDB Molecule:adrenodoxin, mitochondrial; PDBTitle: crystal structure of human ferredoxin-1 (fdx1) in complex with iron-2 sulfur cluster 41 d1b9ra_ not modelled 99.5 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 42 c1l6vA_ not modelled 99.2 19 PDB header:electron transport Chain: A: PDB Molecule:adrenodoxin 1; PDBTitle: structure of reduced bovine adrenodoxin 43 d2fug33 not modelled 98.9 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 44 d3c8ya2 not modelled 98.7 26 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 45 c1c4cA_ not modelled 98.6 26 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum 46 c2fugC_ not modelled 98.3 25 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 47 d1t3qa2 not modelled 98.3 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 48 d1n62a2 not modelled 98.2 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 49 d1vlba2 not modelled 98.2 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 50 d1ffva2 not modelled 98.1 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 51 d1dgja2 not modelled 98.1 17 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 52 c3hrdH_ not modelled 98.0 21 PDB header:oxidoreductase Chain: H: PDB Molecule:nicotinate dehydrogenase small fes subunit; PDBTitle: crystal structure of nicotinate dehydrogenase 53 c1t3qD_ not modelled 98.0 23 PDB header:oxidoreductase Chain: D: PDB Molecule:quinoline 2-oxidoreductase small subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86 54 d1rm6c2 not modelled 98.0 24 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 55 c1rm6F_ not modelled 97.9 27 PDB header:oxidoreductase Chain: F: PDB Molecule:4-hydroxybenzoyl-coa reductase gamma subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica 56 c4zohC_ not modelled 97.9 17 PDB header:oxidoreductase Chain: C: PDB Molecule:putative oxidoreductase iron-sulfur subunit; PDBTitle: crystal structure of glyceraldehyde oxidoreductase 57 c1n60D_ not modelled 97.9 14 PDB header:oxidoreductase Chain: D: PDB Molecule:carbon monoxide dehydrogenase small chain; PDBTitle: crystal structure of the cu,mo-co dehydrogenase (codh); cyanide-2 inactivated form 58 d2bs2b2 not modelled 97.8 26 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 59 c1ffuA_ not modelled 97.8 13 PDB header:hydrolase Chain: A: PDB Molecule:cuts, iron-sulfur protein of carbon monoxide PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava which lacks the mo-pyranopterin moiety of the3 molybdenum cofactor 60 d1kf6b2 not modelled 97.7 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 61 c2bs2E_ not modelled 97.7 26 PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes 62 c2h89B_ not modelled 97.5 33 PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound 63 c2b76N_ not modelled 97.5 28 PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation 64 d1jroa2 not modelled 97.4 15 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 65 c2w3rG_ not modelled 97.3 15 PDB header:oxidoreductase Chain: G: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine 66 c3vrbF_ not modelled 97.3 31 PDB header:oxidoreductase/oxidoreductase inhibitor Chain: F: PDB Molecule:iron-sulfur subunit of succinate dehydrogenase; PDBTitle: mitochondrial rhodoquinol-fumarate reductase from the parasitic2 nematode ascaris suum with the specific inhibitor flutolanil and3 substrate fumarate 67 d1v97a2 not modelled 97.3 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 68 d1nekb2 not modelled 97.3 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 69 c1nekB_ not modelled 97.1 26 PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound 70 c3b9jI_ not modelled 97.1 13 PDB header:oxidoreductase Chain: I: PDB Molecule:xanthine oxidase; PDBTitle: structure of xanthine oxidase with 2-hydroxy-6-methylpurine 71 c1vlbA_ not modelled 97.1 13 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: structure refinement of the aldehyde oxidoreductase from2 desulfovibrio gigas at 1.28 a 72 c3eubJ_ not modelled 97.0 13 PDB header:oxidoreductase Chain: J: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine 73 c1dgjA_ not modelled 96.5 17 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774 74 c3zyvA_ not modelled 96.4 17 PDB header:oxidoreductase Chain: A: PDB Molecule:aox3; PDBTitle: crystal structure of the mouse liver aldehyde oxidase 3 (maox3) 75 c4uhxA_ not modelled 96.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidase; PDBTitle: human aldehyde oxidase in complex with phthalazine and thioridazine 76 c1wygA_ not modelled 95.6 15 PDB header:oxidoreductase Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s) 77 c1ep3B_ not modelled 95.4 15 PDB header:oxidoreductase Chain: B: PDB Molecule:dihydroorotate dehydrogenase b (pyrk subunit); PDBTitle: crystal structure of lactococcus lactis dihydroorotate dehydrogenase2 b. data collected under cryogenic conditions. 78 d1ep3b2 not modelled 93.8 15 Fold:Ferredoxin reductase-like, C-terminal NADP-linked domain Superfamily:Ferredoxin reductase-like, C-terminal NADP-linked domain Family:Dihydroorotate dehydrogenase B, PyrK subunit 79 c4ylfA_ not modelled 93.3 26 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase b (nad(+)), electron transfer PDBTitle: insights into flavin-based electron bifurcation via the nadh-dependent2 reduced ferredoxin-nadp oxidoreductase structure 80 c1x31A_ not modelled 53.6 9 PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 81 d2hj1a1 not modelled 50.0 10 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:HI0395-like 82 c2hj1A_ not modelled 50.0 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a 3d domain-swapped dimer of protein hi0395 from2 haemophilus influenzae 83 c2kmmA_ not modelled 44.8 31 PDB header:hydrolase Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'- PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481) 84 d1wx8a1 not modelled 36.2 21 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 85 c3hvzB_ not modelled 35.4 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a 86 d1tkea1 not modelled 29.8 26 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 87 d1j8ca_ not modelled 24.2 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 88 d1wxma1 not modelled 22.5 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ras-binding domain, RBD 89 d2al3a1 not modelled 22.3 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:UBX domain 90 d2bwfa1 not modelled 18.7 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 91 c1feoA_ not modelled 17.4 63 PDB header:toxin Chain: A: PDB Molecule:omega-conotoxin mviia-gly; PDBTitle: solution structure of omega-conotoxin mviia with c-terminal2 gly 92 c1wwtA_ not modelled 16.6 17 PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase, cytoplasmic; PDBTitle: solution structure of the tgs domain from human threonyl-2 trna synthetase 93 d1nyra2 not modelled 15.6 18 Fold:beta-Grasp (ubiquitin-like) Superfamily:TGS-like Family:TGS domain 94 d2vv5a2 not modelled 15.3 36 Fold:Ferredoxin-like Superfamily:Mechanosensitive channel protein MscS (YggB), C-terminal domain Family:Mechanosensitive channel protein MscS (YggB), C-terminal domain 95 c2kanA_ not modelled 14.2 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ar3433a; PDBTitle: solution nmr structure of ubiquitin-like domain of2 arabidopsis thaliana protein at2g32350. northeast3 structural genomics consortium target ar3433a 96 c3j60I_ not modelled 14.0 26 PDB header:ribosome Chain: I: PDB Molecule:40s ribosomal protein s8e; PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 97 d2znvb1 not modelled 13.9 17 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 98 d1rutx4 not modelled 13.8 31 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 99 c3bl5E_ not modelled 13.5 29 PDB header:hydrolase Chain: E: PDB Molecule:queuosine biosynthesis protein quec; PDBTitle: crystal structure of quec from bacillus subtilis: an enzyme2 involved in preq1 biosynthesis