##gff-version 2 ##source-version exonerate:protein2genome:local 2.2.0 ##date 2015-01-16 ##type DNA # # # seqname source feature start end score strand frame attributes # seq1 exonerate:protein2genome:local gene 8 11 3652 - . gene_id 0 ; sequence seq2 ; gene_orientation . seq1 exonerate:protein2genome:local cds 9 11 . - . seq1 exonerate:protein2genome:local exon 9 11 . - . insertions 3 ; deletions 6 seq1 exonerate:protein2genome:local similarity 8 11 3652 - . alignment_id 0 ; Query seq2 ; Align 11 1 3 ##FASTA >seq1 ACTACGACACGACGACGACGACG >seq2 CDEQEATGTQDAQEQAQC