// $Id: // // FORESTER -- software libraries and applications // for evolutionary biology research and applications. // // Copyright (C) 2008-2009 Christian M. Zmasek // Copyright (C) 2008-2009 Burnham Institute for Medical Research // All rights reserved // // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public // License as published by the Free Software Foundation; either // version 2.1 of the License, or (at your option) any later version. // // This library is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU // Lesser General Public License for more details. // // You should have received a copy of the GNU Lesser General Public // License along with this library; if not, write to the Free Software // Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA // // Contact: phylosoft @ gmail . com // WWW: https://sites.google.com/site/cmzmasek/home/software/forester package org.forester.protein; import org.forester.util.ForesterUtil; public class ProteinId implements Comparable { final private String _id; public ProteinId( final String id ) { if ( ForesterUtil.isEmpty( id ) ) { throw new IllegalArgumentException( "attempt to create new protein id from empty or null string" ); } _id = id.trim(); } @Override public int compareTo( final ProteinId protein_id ) { if ( this == protein_id ) { return 0; } return getId().toLowerCase().compareTo( protein_id.getId().toLowerCase() ); } @Override public boolean equals( final Object o ) { if ( this == o ) { return true; } else if ( o == null ) { throw new IllegalArgumentException( "attempt to check protein id equality to null" ); } else if ( o.getClass() != this.getClass() ) { throw new IllegalArgumentException( "attempt to check protein id equality to " + o + " [" + o.getClass() + "]" ); } else { return getId().equals( ( ( ProteinId ) o ).getId() ); } } public String getId() { return _id; } @Override public int hashCode() { return getId().hashCode(); } @Override public String toString() { return getId(); } }