BioJSON
BioJSON is a standardise JavaScript Object Notation (JSON) format for exchange of Bio-informatics Sequence Alignment data.
BioJSON-1.0 schema/documentation is available at http://www.jalview.org/builds/develop/examples/biojson-doc/.
You can keep up to date with BioJSON development and latest news at https://github.com/jalview/biojson/wiki.
Features supported
Export/Import of the following alignment elements are supported in BioJSON-1.0:
- Alignment Annotations
- Alignment Features
- Alignment Sequences
- Color Scheme
- Hidden Columns
- Hidden Sequences
- Sequence Groups
Features not yet supported
Export/Import of the following alignment elements are not supported in BioJSON-1.0:
- Reference sequence
- Representative sequence
- Trees
- 3D Structures