#-------------------------------------------------------------------------------
# Jalview - A Sequence Alignment Editor and Viewer (Version 2.5.1)
# Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
#
# This file is part of Jalview.
#
# Jalview is free software: you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
#
# Jalview is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty
# of MERCHANTABILITY or FITNESS FOR A PARTICULAR
# PURPOSE. See the GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License along with Jalview. If not, see
DAS Sequence Feature Retrieval
Jalview includes a client for retrieving sequences and their features via the Distributed Annotation System.
If your DAS source selection contains sources which use Uniprot
accession ids, you will be asked whether Jalview should find Uniprot
Accession ids for the given sequence names. It is important to realise
that many DAS sources only use Uniprot accession ids, rather than
Swissprot/Uniprot sequence names.
The database reference
fetcher documentation describes how Jalview discovers what database
references are appropriate for the sequences in the alignment.
DAS support was introduced in Jalview Version 2.1.