Many new keyboard shortcuts have been added in Jalview 2.2 to make editing, selecting and navigating an alignment even easier. Some of the commands in the Edit and View menus present in earlier releases have also been moved into their own Select and Format menus. Some of the important new keystrokes are shown below :

• Page Up and Page Down scrolls through the alignment view.
• Control I inverts the currently selected sequence set, and Control Alt I will invert the currently selected set of columns.
• Control+V will paste the contents of the clipboard to the current alignment window, and Control Shift V pastes the data to a new window.