Jalview local Jnlp File

<jnlp spec="1.0+" codebase="http://www.jalview.org/webstart/">
  <information>
    <title>Jalview</title>
    <vendor>The Barton Group</vendor>
    <homepage href="http://www.jalview.org"/>
    <description>Jalview Multiple Alignment Editor</description>
    <description kind="short">Jalview</description>
    <icon href="http://www.jalview.org/webstart/logo_big.gif" kind="default"/>
    <association extensions="fa" mime-type="application-x/ext-file"/>
    <association extensions="fasta" mime-type="application-x/ext-file"/>
    <association extensions="fastq" mime-type="application-x/ext-file"/>
    <association extensions="blc" mime-type="application-x/ext-file"/>
    <association extensions="msf" mime-type="application-x/ext-file"/>
    <association extensions="pfam" mime-type="application-x/ext-file"/>
    <association extensions="aln" mime-type="application-x/ext-file"/>
    <association extensions="pir" mime-type="application-x/ext-file"/>
    <association extensions="stk" mime-type="application-x/ext-file"/>
    <offline-allowed/>
  </information>
  <security>
    <all-permissions/>
  </security>
  <resources>
  <!-- the additional memory parameters are here -->
  <j2se version="1.5+" initial-heap-size="500M" max-heap-size="1000M"/>
		<jar href="jalview.jar"/>
		<jar href="JGoogleAnalytics-0.2.1-SNAPSHOT.jar"/>
		<jar href="Jmol-12.1.13.jar"/>
		<jar href="activation.jar"/>
		<jar href="axis.jar"/>
		<jar href="castor-1.1-cycle-xml.jar"/>
		<jar href="commons-discovery.jar"/>
		<jar href="commons-logging.jar"/>
		<jar href="jaxrpc.jar"/>
		<jar href="jhall.jar"/>
		<jar href="log4j-1.2.8.jar"/>
		<jar href="mail.jar"/>
		<jar href="min-jaba-client.jar"/>
		<jar href="regex.jar"/>
		<jar href="saaj.jar"/>
		<jar href="vamsas-client.jar"/>
		<jar href="wsdl4j.jar"/>
		<jar href="xercesImpl.jar"/>
		<jar href="xml-apis.jar"/>
		<property name="jalview.version" value="2.6.1"/>
  </resources>
  <application-desc main-class="jalview.bin.Jalview"/>
</jnlp>
If you have problems, send an email to jalview-discuss