Alignment Window Select Menu
- Find... (Control F)
Opens the Find dialog box to search for residues, sequence name or residue
position within the alignment and create new sequence features from the queries.
- Select All (Control A)
Selects all the sequences and residues in the alignment.
Use <CTRL> and A (<APPLE> and A on a MacOSX) to select all.
- Deselect All (Escape)
Removes the current selection box (red dashed box) from the
alignment window. All selected sequences, residues and marked columns
will be deselected.
Use <ESCAPE> to deselect all.
- Invert Sequence Selection (Control I)
Any sequence ids currently not selected will replace the
current selection.
- Invert Column Selection (Control Alt I)
Any columns currently not selected will replace the current
column selection.
- Create Group (Control G)
Create a group containing the currently selected sequences.
- Remove Group (Shift Control G)
Ungroup the currently selected sequence group.
- Make Groups for selection
The
currently selected groups of the alignment will be subdivided
according to the contents of the currently selected region.
Use
this to subdivide an alignment based on the different combinations
of residues at marked columns.
- Undefine Groups (Control U)
The alignment will be reset with no defined groups.
WARNING: This cannot be undone.
- Select/Hide Columns by Annotation
Select or Hide columns in the alignment according to
secondary structure, labels and values shown in alignment
annotation rows.