Alignment Window Select Menu
- Find...
(Control F)
Opens the Find dialog box to
search for residues, sequence name or residue position within
the alignment and create new sequence features from the queries.
- Select All (Control A)
Selects all the sequences and residues in the alignment.
Use <CTRL> and A (<APPLE> and A on a MacOSX) to
select all.
- Deselect All (Escape)
Removes the current selection box (red dashed box) from the
alignment window. All selected sequences, residues and marked
columns will be deselected.
Use
<ESCAPE> to deselect all.
- Invert Sequence Selection (Control I)
Any sequence ids currently not selected will replace the
current selection.
- Invert Column Selection (Control Alt I)
Any columns currently not selected will replace the current
column selection.
- Create Group (Control G)
Create
a group containing the currently selected sequences.
- Remove Group (Shift Control G)
Ungroup
the currently selected sequence group.
- Make Groups for selection
The
currently selected groups of the alignment will be subdivided
according to the contents of the currently selected region.
Use
this to subdivide an alignment based on the different
combinations of residues at marked columns.
- Undefine Groups (Control U)
The alignment will be reset with no defined groups.
WARNING: This cannot be undone.
- Select/Hide Columns by Annotation
Select or
Hide columns in the alignment according to secondary structure,
labels and values shown in alignment annotation rows.